DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and Zic2

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:NP_033600.3 Gene:Zic2 / 22772 MGIID:106679 Length:529 Species:Mus musculus


Alignment Length:342 Identity:104/342 - (30%)
Similarity:153/342 - (44%) Gaps:84/342 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IFNSGPHSRGIYEPPLGYFTPYNTPPYIAAY-------------SDSGSWLADHHQHHQQQHQQH 59
            :|......|.:..|        .|.||.||.             .:..:..|.||.||.      
Mouse   187 VFGRSEQYRQVASP--------RTDPYSAAQLHNQYGPMNMNMGMNMAAAAAHHHHHHH------ 237

  Fly    60 QQQMQHIRFPTPPITPPRPIAGYGYRQRTQSVIMKARGQQDELCR--SPVEFPDDSKSCSSSSEC 122
                             .|.|.:.| .|.|.:      :|:.:|:  .|.:..:..||       
Mouse   238 -----------------HPGAFFRY-MRQQCI------KQELICKWIDPEQLSNPKKS------- 271

  Fly   123 GTASDFVCNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHT 187
                        |::.|.|:..|..||:..| :.......:.|.|..|.|..:.|.|:||::.|.
Mouse   272 ------------CNKTFSTMHELVTHVSVEH-VGGPEQSNHVCFWEECPREGKPFKAKYKLVNHI 323

  Fly   188 RTHTKEKPHRCHL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTRTHSM 250
            |.||.|||..|..  |.|.|:|:||||||.|:|:||||::|.||||.:.::|||||.||...|:.
Mouse   324 RVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTS 388

  Fly   251 EKPYMCKVAGCQKRYTDPSSLRKHVKTFKHSIHLIASQPLT-----LPSVPCLLEASSE--SAFT 308
            :|||:||:  |.|.||.|||||||:|..:.|.....|.|..     ..:.|.|:..|:|  |:..
Mouse   389 DKPYLCKM--CDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSN 451

  Fly   309 CLPAASSVESTSSSSSA 325
            ..|||::..:.:::::|
Mouse   452 LSPAAAAAAAAAAAAAA 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 8/19 (42%)
COG5048 192..>271 CDD:227381 44/80 (55%)
C2H2 Zn finger 198..218 CDD:275368 12/21 (57%)
C2H2 Zn finger 226..248 CDD:275368 12/21 (57%)
C2H2 Zn finger 256..277 CDD:275368 13/20 (65%)
Zic2NP_033600.3 zf_ZIC 249..294 CDD:436441 13/70 (19%)
C2H2 Zn finger 306..326 CDD:275368 8/19 (42%)
SFP1 <328..412 CDD:227516 49/85 (58%)
C2H2 Zn finger 334..356 CDD:275368 12/21 (57%)
C2H2 Zn finger 364..386 CDD:275368 12/21 (57%)
C2H2 Zn finger 394..414 CDD:275368 14/21 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..451 15/45 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..529
Blue background indicates that the domain is not in the aligned region.

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