DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and glis2a

DIOPT Version :9

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_009294691.1 Gene:glis2a / 102725534 ZFINID:ZDB-GENE-130102-1 Length:446 Species:Danio rerio


Alignment Length:290 Identity:117/290 - (40%)
Similarity:149/290 - (51%) Gaps:40/290 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 PTPPITPPRPI-AGYGYRQRTQSVIMKARG---QQDEL-------------CRSPVEFPDDSKSC 116
            |:...:||.|| :|..:......:.:::..   .:|..             ...|:..|......
Zfish    67 PSSSPSPPSPIDSGASWSPTAPLLALESESTPYHEDSASPPPGFQFFLPIGAEGPLRLPSSMLIG 131

  Fly   117 SSSSECGTASDFVCNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARY 181
            ..|.|........|.|..|..:|::|..|..||...|.......| |.|.|.||.|..|||||||
Zfish   132 QHSPEPSGDEQLACRWLKCHLLFESLQDLVDHVNDSHVKPEKASG-YCCHWEGCARKGRGFNARY 195

  Fly   182 KMLVHTRTHTKEKPHRCHLCEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKHTR 246
            |||:|.||||.||||.|..|.|||||.||||||.|||:|||||.|.:|||.|.||||||||||||
Zfish   196 KMLIHIRTHTNEKPHHCPTCHKSFSRLENLKIHTRSHTGEKPYICPYEGCNKRYSNSSDRFKHTR 260

  Fly   247 THSMEKPYMCKVAGCQKRYTDPSSLRKHVKTFKHSIHLIASQPLTLPSVPCLLEASSESAFTCLP 311
            ||.::|||.||:.||.||||||||||||:|...|::                ::..:.|     |
Zfish   261 THYVDKPYCCKMVGCLKRYTDPSSLRKHIKAHGHAV----------------VQDRAAS-----P 304

  Fly   312 AASSVES-TSSSSSARYYDDSNNEPSDYSL 340
            ..:.:|| |:|....|..|.|:...:::.|
Zfish   305 RTNRLESDTASLVDGRRMDQSHPTAANFIL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 14/19 (74%)
zf-H2C2_2 183..207 CDD:290200 16/23 (70%)
COG5048 192..>271 CDD:227381 58/78 (74%)
C2H2 Zn finger 198..218 CDD:275368 14/19 (74%)
zf-H2C2_2 210..237 CDD:290200 19/26 (73%)
C2H2 Zn finger 226..248 CDD:275368 17/21 (81%)
C2H2 Zn finger 256..277 CDD:275368 16/20 (80%)
glis2aXP_009294691.1 C2H2 Zn finger 188..204 CDD:275368 12/15 (80%)
zf-H2C2_2 200..221 CDD:290200 14/20 (70%)
COG5048 208..>285 CDD:227381 57/76 (75%)
C2H2 Zn finger 212..232 CDD:275368 14/19 (74%)
zf-H2C2_2 224..251 CDD:290200 19/26 (73%)
C2H2 Zn finger 240..262 CDD:275368 17/21 (81%)
C2H2 Zn finger 270..292 CDD:275368 17/21 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594660
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BJB2
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006993
OrthoInspector 1 1.000 - - otm25770
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19818
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4587
SonicParanoid 1 1.000 - - X217
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.830

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