DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and gli1

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002939471.1 Gene:gli1 / 100494064 XenbaseID:XB-GENE-482644 Length:1371 Species:Xenopus tropicalis


Alignment Length:363 Identity:123/363 - (33%)
Similarity:170/363 - (46%) Gaps:53/363 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GPHSRGIYEPPLGYFTPYN-TPPYIAAYSDSGSWLADHHQHHQQQ---HQQHQQQMQHIRFPTPP 72
            |..|.|...|.|||....| ..|...:|.::.....:.|.|...:   ..|.:..::|.:..:.|
 Frog   127 GHLSIGTISPSLGYQNCLNHQRPQGGSYGNNPLMPYNSHDHMSSRGVGMLQPRSSIKHCQLKSEP 191

  Fly    73 I--TPPRPIAGYGYRQRTQSVIMK--ARGQQDELCRSPVEFPDDSKSCSSSSECGTASDFVCNWT 133
            :  |...||........::..|..  :.|.||.|. ..::..||.:......|..|..:..|:|.
 Frog   192 LSSTGLDPIGSKRLEDGSEGDISSPASVGTQDPLL-GLLDGRDDLEKDDGKHEPETVYETNCHWE 255

  Fly   134 DCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKMLVHTRTHTKEKPHRC 198
            .|.:.|||.:.|..|:...|......:  :.|.|:.|.|..|.|.|:|.::||.|.||.||||:|
 Frog   256 SCTKEFDTQEHLVHHINNEHIHGEKKE--FVCHWQDCSRELRPFKAQYMLVVHMRRHTGEKPHKC 318

  Fly   199 HL--CEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFKH-TRTHSMEKPYMCKVAG 260
            ..  |.|::||.||||.|:|||:|||||.|..|||.||:||:|||.|| .||||.||||:||:.|
 Frog   319 TFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPG 383

  Fly   261 CQKRYTDPSSLRKHVKTF---------KH------------------------SIHLIASQP--- 289
            |.|||||||||||||||.         ||                        .:.:.||..   
 Frog   384 CTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDGMPRTQSGHEGSGNHTVKGENQLDMEASSARKE 448

  Fly   290 ---LTLPSVPCLLEASSESAFTCLPAASSVESTSSSSS 324
               |.:|.:....:.|.....:|....|.:.||:::.|
 Frog   449 DGRLAVPDITLKSQPSPGGQSSCSSERSPLGSTNNNDS 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 9/19 (47%)
COG5048 192..>271 CDD:227381 54/81 (67%)
C2H2 Zn finger 198..218 CDD:275368 11/21 (52%)
C2H2 Zn finger 226..248 CDD:275368 14/22 (64%)
C2H2 Zn finger 256..277 CDD:275368 17/20 (85%)
gli1XP_002939471.1 SFP1 <312..402 CDD:227516 62/89 (70%)
C2H2 Zn finger 318..340 CDD:275368 11/21 (52%)
C2H2 Zn finger 348..371 CDD:275368 14/22 (64%)
C2H2 Zn finger 379..400 CDD:275368 17/20 (85%)

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