DRSC/TRiP Functional Genomics Resources

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Protein Alignment sug and glis2

DIOPT Version :10

Sequence 1:NP_610826.1 Gene:sug / 36424 FlyBaseID:FBgn0033782 Length:384 Species:Drosophila melanogaster
Sequence 2:XP_002932507.2 Gene:glis2 / 100492770 XenbaseID:XB-GENE-12564475 Length:493 Species:Xenopus tropicalis


Alignment Length:247 Identity:116/247 - (46%)
Similarity:133/247 - (53%) Gaps:40/247 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PVEFPDDSKSCSSSSECGTASDFVCNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGC 170
            |..|....|....|.|.......||.|..|:|:|:.|..|..||...| :....|..|.|.|.||
 Frog   137 PSMFMSPPKEKRLSLEYTEQKQLVCQWAKCNRLFELLQELVDHVNDFH-VKPEKDAGYCCHWEGC 200

  Fly   171 QRSERGFNARYKMLVHTRTHTKEKPHRCHLCEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAY 235
            .|..||||||||||:|.||||.|:||.|..|.|||||.||||||.|||:|||||.|.:|||.|.|
 Frog   201 ARRGRGFNARYKMLIHIRTHTNERPHCCPTCHKSFSRLENLKIHNRSHTGEKPYMCPYEGCNKRY 265

  Fly   236 SNSSDRFKHTRTHSMEKPYMCKVAGCQKRYTDPSSLRKHVKTFKH----------SIH------- 283
            |||||||||||||.::|||.||:.|||||||||||||||:|...|          .||       
 Frog   266 SNSSDRFKHTRTHYVDKPYYCKMPGCQKRYTDPSSLRKHIKAHGHFISHQQRQLLKIHQPPKLPV 330

  Fly   284 -------------------LIASQPLTLPSVPCLLEASSESAFTCLPAASSV 316
                               :..||.|.:|..|..|:.||   ..|...||::
 Frog   331 TGDSSYTNGTQLIIPNPAAIFGSQSLPIPLTPGPLDLSS---LACSGMASAL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sugNP_610826.1 C2H2 Zn finger 170..190 CDD:275368 14/19 (74%)
COG5048 192..>271 CDD:227381 58/78 (74%)
C2H2 Zn finger 198..218 CDD:275368 14/19 (74%)
C2H2 Zn finger 226..248 CDD:275368 17/21 (81%)
C2H2 Zn finger 256..277 CDD:275368 17/20 (85%)
glis2XP_002932507.2 C2H2 Zn finger 204..220 CDD:275368 12/15 (80%)
COG5048 224..>301 CDD:227381 57/76 (75%)
C2H2 Zn finger 228..248 CDD:275368 14/19 (74%)
C2H2 Zn finger 256..278 CDD:275368 17/21 (81%)
C2H2 Zn finger 286..308 CDD:275368 18/21 (86%)

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