DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13319 and Psmg4

DIOPT Version :9

Sequence 1:NP_001163131.1 Gene:CG13319 / 36423 FlyBaseID:FBgn0033781 Length:132 Species:Drosophila melanogaster
Sequence 2:NP_001123351.1 Gene:Psmg4 / 689623 RGDID:1589955 Length:121 Species:Rattus norvegicus


Alignment Length:76 Identity:25/76 - (32%)
Similarity:38/76 - (50%) Gaps:3/76 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 LAVAMPSRNPASSQSLSSTILGGHGQTDSSVLAAKLSKRYCRQFYVSLNL-KLDRLMGPLFEKTL 120
            |||||.||  ..|..:.:::.|....|.|:.||.:|:::..:|.:||.|| ..|.....|.|..:
  Rat    48 LAVAMCSR--FDSIPVCTSLFGDTSDTTSTGLAQRLARKTSKQVFVSYNLSNTDSNFTLLVENRI 110

  Fly   121 VTYMQDHLEHF 131
            ...|:...|.|
  Rat   111 KEEMETFPEKF 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13319NP_001163131.1 PAC4 36..106 CDD:292711 17/48 (35%)
Psmg4NP_001123351.1 PAC4 28..95 CDD:406487 17/48 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2C76C
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105203
Panther 1 1.100 - - LDO PTHR33559
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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