DRSC/TRiP Functional Genomics Resources

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Protein Alignment vg and Vgll2

DIOPT Version :10

Sequence 1:NP_523723.1 Gene:vg / 36421 FlyBaseID:FBgn0003975 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_001101100.1 Gene:Vgll2 / 309772 RGDID:1311903 Length:323 Species:Rattus norvegicus


Alignment Length:222 Identity:70/222 - (31%)
Similarity:98/222 - (44%) Gaps:63/222 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 QQHQHHNESSCSSGPDSPRHAHSHSHPLHGGGGATGGPSSAGGTGSGGGDGGGTGAIPKNLPALE 263
            |:.|..:.|.|||                    |:|..:.:..|.:...:..|:       |..|
  Rat    36 QEAQECSASPCSS--------------------ASGSSTFSNQTPASVKEEEGS-------PEKE 73

  Fly   264 TPMGSGGGGLAGSGQGQAQYLSASCVVFTNYSGDTASQVDEHFSRALNYNNKDSKESSS------ 322
            .|             .:|:|:::.||:||.:.||.:|.|||||||||:..:..:...||      
  Rat    74 RP-------------PEAEYINSRCVLFTYFQGDISSVVDEHFSRALSQPSSYTPSCSSSKTHRS 125

  Fly   323 ----------PMSNRNFPPSFWNSNYVHPIPAPTHHQVSDLYGTATDTGYATDPWVPHAAHYGSY 377
                      ||:.|:||.|||||.|..|:|||..   |.|....::..:||||:.|.|.|...:
  Rat   126 SGPWRAEGTFPMNQRSFPASFWNSAYQAPVPAPLG---SPLAAAHSELPFATDPYTPAALHGHLH 187

  Fly   378 AHAA---HAHAAHAHAYHHNMAQYGSL 401
            ..||   |||..|||. ||..|..|:|
  Rat   188 QGAADWHHAHPHHAHP-HHPYALGGAL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vgNP_523723.1 Vg_Tdu 282..312 CDD:462203 17/29 (59%)
Vgll2NP_001101100.1 Vg_Tdu 79..109 CDD:462203 17/29 (59%)

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