DRSC/TRiP Functional Genomics Resources

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Protein Alignment vg and vgll3

DIOPT Version :10

Sequence 1:NP_523723.1 Gene:vg / 36421 FlyBaseID:FBgn0003975 Length:453 Species:Drosophila melanogaster
Sequence 2:XP_021334557.1 Gene:vgll3 / 100331764 ZFINID:ZDB-GENE-130530-600 Length:330 Species:Danio rerio


Alignment Length:375 Identity:94/375 - (25%)
Similarity:122/375 - (32%) Gaps:123/375 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 HSLHSSHRTHAHSLAHAHTHPHSHTHTHTHQTKEEDLIVPRSEAEARLVGSQQHQHHNESSCSSG 212
            |..:.:|.....:.|.|..:..::.| |.||                   .||.|....|..|..
Zfish    10 HQSYGAHHYLPSTSAAAAAYKAAYLH-HHHQ-------------------QQQQQQKKFSVFSRM 54

  Fly   213 PDS---PRHAHSHSHPLHGGGGATGGPSSAGGTGSGGGDGGGTGAIPKNLPALETPMGSGGGGLA 274
            .||   |.|...:..|     ||....|.                 |:.||..|...|.......
Zfish    55 QDSEEFPSHCGQNKQP-----GALKSRSE-----------------PELLPEEEQSSGEEDRCKD 97

  Fly   275 GSGQGQAQYLSASCVVFTNYSGDTASQVDEHFSRALNYNNKDS--------------KESSS--- 322
            ......|:||||.|||||.:.||....|||||||||:.|:..|              ||.:|   
Zfish    98 TLQPADAEYLSARCVVFTYFRGDIGDVVDEHFSRALSQNSAFSNDTKASRLNPGGPWKEGNSHSE 162

  Fly   323 -----------------------PMSNRNFPPS---------FWNSNYVHPIPAPT----HHQVS 351
                                   |.|:.:||||         .|:|:.:.|.|:..    |:.: 
Zfish   163 GQTSSLPSSLWGSGYPSQSSPCVPSSHHDFPPSAAFHPADNGIWSSHSLAPPPSALTDSWHYSL- 226

  Fly   352 DLYGTATDTGYATDPWVPHAAHYGSYAHAAHAHAAHAHAYHHNMA-----QYGSLLRLPQQYASH 411
               |..:..||      ||......:.|..|.|....|..||..:     ::..|| ||...||.
Zfish   227 ---GPQSGAGY------PHVHEMYPHMHPRHPHPHAHHVLHHAHSPALDPRFNPLL-LPGVRASC 281

  Fly   412 GSRLHHDQQTAHALEYSSYPT---MAGLEAQV-----AQVQESSKDLYWF 453
            ......|..... ||.||.||   .|.....|     |..|:.:|...||
Zfish   282 SPTSCTDTIKTE-LEPSSIPTPSWPASFHGSVDIYDTALEQDKAKASVWF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vgNP_523723.1 Vg_Tdu 282..312 CDD:462203 20/29 (69%)
vgll3XP_021334557.1 Vg_Tdu 105..135 CDD:462203 20/29 (69%)

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