DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AspRS and nars2

DIOPT Version :9

Sequence 1:NP_001260930.1 Gene:AspRS / 36420 FlyBaseID:FBgn0002069 Length:531 Species:Drosophila melanogaster
Sequence 2:XP_021337111.1 Gene:nars2 / 561673 ZFINID:ZDB-GENE-060929-596 Length:505 Species:Danio rerio


Alignment Length:515 Identity:123/515 - (23%)
Similarity:215/515 - (41%) Gaps:95/515 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCFLILRQQSSTVQCILAVGD 124
            |.||..|.:.|:.  :...|....|.     ::|.|.:.|.:....||.|...||.....:....
Zfish    29 SRMISKKMRVSDA--LACKETGSDVR-----IQGWVRSVRPQKDNLFLHLNDGSSLQPLQVVASS 86

  Fly   125 VISKQMVKFAGNIPKESIIDIQAKPVAVSSKIESCTEQSLELSVEQIFVISQAK-AQLPLQIEDA 188
            .::.:.:.|.      ..:||........:|     .|::||..:.|.|:.:.. ...|.:|::.
Zfish    87 QLNTRDLTFG------CAVDITGTLEKSPNK-----RQNVELQAQSIKVVGECNPMDFPFKIKER 140

  Fly   189 SRPENADDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKI 253
            ...|.......|..|.|..:.:    |.:|:.|.       |.:...|||    .|:.:||||.|
Zfish   141 HPLEYIRQFPHLRCRTNAFSSM----LRIRSEAT-------AAIQSFFRD----HGYVQIHTPVI 190

  Fly   254 ISAASEGGANVFTVS------------YFKDSAYLAQSPQLYKQMAIA----------------- 289
            .|...||...:|.|.            :|...|||..|.||:.::...                 
Zfish   191 TSNDCEGAGELFQVEPTGDKKDSDDPHFFSVPAYLTVSGQLHLEVMAGMFYWNLIPHGERKDMHD 255

  Fly   290 --ADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEMAFKYHYHEVLHTIGNTFTSIFKGLRDKYA 352
              :.|..|||.|..||||:|.:.|||.||..::.|:||.....:::..:.:.|.:..:.:.....
Zfish   256 PLSAFSAVYTFGPTFRAENSQSRRHLAEFYMVEAEIAFTESLDDLMKVMEDLFKAATEHVFSNCT 320

  Fly   353 KEIE------SVGQQYKVDAF---KFLEPPLILQFADGVAMLREAGVE-TGDEE---DLSTPNEK 404
            :::|      :.|.:.:||..   ||    .::.:.:.:.:|:.:... |...|   ||.|.:||
Zfish   321 EDVELFHKHVAPGHREQVDPMLNRKF----NVISYTEAIDILKSSSQNFTFSPEWGCDLQTEHEK 381

  Fly   405 LLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVY-SNSYDMFMRGEEILSGA----QRIHD 464
            .   |||...:|..:::: :|..::|||...:.::|.: :.:.|:.:.|...|.|.    :|:| 
Zfish   382 F---LVKHCGNTPVFVVN-YPYELKPFYARDNQDHPRHTAAAVDLLVPGVGELCGGSLREERLH- 441

  Fly   465 PEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGGIGMERVVMLYLGLDNIRKTSMFPR 524
              .|.:|....|::.: .|.|::...:|..||.|.|:|.||.:...|||:||:....|.|
Zfish   442 --LLTQRLSQAGLEDT-YAWYLQLREFGSVPHGGFGMGFERYLQCILGLNNIKDAIPFAR 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRSNP_001260930.1 PLN02850 49..531 CDD:215456 123/515 (24%)
AspRS_cyto_N 89..187 CDD:239815 19/98 (19%)
AsxRS_core 203..527 CDD:238399 95/371 (26%)
nars2XP_021337111.1 asnC 34..502 CDD:235176 120/510 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.