DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AspRS and AsnRS-m

DIOPT Version :9

Sequence 1:NP_001260930.1 Gene:AspRS / 36420 FlyBaseID:FBgn0002069 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_611176.1 Gene:AsnRS-m / 36909 FlyBaseID:FBgn0034177 Length:460 Species:Drosophila melanogaster


Alignment Length:410 Identity:103/410 - (25%)
Similarity:174/410 - (42%) Gaps:62/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 VAVSSKIESCTEQSLELSVEQIFVISQAKAQ--LPLQIEDASRPENADDAEGLNIRVNQDTRLDN 212
            :|...||:.....|.||...|:.::::.:.|  .|...:....||..  .|.|::|    :|:|.
  Fly    75 IAAVGKIQVAPNGSFELHANQVEMLAEGRLQEGYPFSPKQKHPPEYV--REHLHLR----SRVDF 133

  Fly   213 RVLDLRT--PANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAASEGGANVFTV-------- 267
            ....:|.  .|.:||           .|.:.:|.|.:|:||.:.:...||...||.|        
  Fly   134 VAAQMRVRHKAQKAI-----------HDYMDDQDFVQINTPLLTTNDCEGAGEVFRVQPDSQDLL 187

  Fly   268 ------------SYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 320
                        |||....:|:.|.||:.: |:.....|.||:...||||:|.:..||.||...:
  Fly   188 KQMNRPNIPMEQSYFDSKVFLSVSGQLHLE-AMTYGLGKTYTLSPAFRAENSKSPLHLAEFYMFE 251

  Fly   321 LEMAFKYHYHEVLHTIGNTFTSIFKGLRDKYAKEIESVGQQYKVDA-FKFLEPP-LILQFADGVA 383
            .|:|......::...|.....|:...|.:...:::....:....:: ..:|:.| .|:.:.:.:.
  Fly   252 AELAHLEEMEKLAQFIEQMLKSVTNRLLETSGEDLSFCQRNSNSNSDLPWLQVPWKIMSYDEALQ 316

  Fly   384 MLREAGVETGDEEDLSTP---NE---KLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPNNPVY 442
            :|:|      :::.|.||   ||   |.....:.|......:::| :|...:|||.....:||..
  Fly   317 VLQE------NKDSLKTPISLNEGFSKDQELFLVAHCGAPVFVVD-WPAQQKPFYMKVSRSNPNR 374

  Fly   443 SNSYDMFMRG-EEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGGIGMERV 506
            .::.|:.|.. .|:..|:.|..||..|    |.|......:..|::..:||..|..|.|:|.||.
  Fly   375 VHALDLLMPAVGELCGGSLRESDPAIL----KSHPHLPKDLEWYVDLRKYGGVPTGGFGMGFERY 435

  Fly   507 VMLYLGLDNIRKTSMFPRDP 526
            :.|..|:.|||....|||.|
  Fly   436 LQLVTGVKNIRDVIPFPRYP 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRSNP_001260930.1 PLN02850 49..531 CDD:215456 103/410 (25%)
AspRS_cyto_N 89..187 CDD:239815 9/38 (24%)
AsxRS_core 203..527 CDD:238399 90/355 (25%)
AsnRS-mNP_611176.1 asnC 13..460 CDD:235176 103/410 (25%)
EcAsnRS_like_N 27..101 CDD:239813 7/25 (28%)
AsxRS_core 115..456 CDD:238399 94/370 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473209
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0017
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.