DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AspRS and AsnRS

DIOPT Version :9

Sequence 1:NP_001260930.1 Gene:AspRS / 36420 FlyBaseID:FBgn0002069 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001260561.1 Gene:AsnRS / 35194 FlyBaseID:FBgn0086443 Length:558 Species:Drosophila melanogaster


Alignment Length:549 Identity:140/549 - (25%)
Similarity:222/549 - (40%) Gaps:106/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSE 79
            |.|.|.||.:.|:.||::.:|...|.......|.:.. .|.:..:.|...::|.|          
  Fly    84 SHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLP-VARKIRIYEGTANRDSR---------- 137

  Fly    80 LSGQVGKGLVWVRGRVHTSRAKGKQ-CFLILRQQSSTVQCILAVGDVISKQMVKFAGNIPKESII 143
                     |.|.|.||..|.:||. .|:.||..:..:||:|      :.|:.:           
  Fly   138 ---------VKVYGWVHRLRRQGKSLIFITLRDGTGFLQCVL------NDQLCQ----------- 176

  Fly   144 DIQAKPVAVSSKIESCTEQSLELSVEQIFVISQAKAQLP----------LQIE-----DASRPEN 193
                            |..:|.||.|...|:......:|          |.::     ..:.|..
  Fly   177 ----------------TYDALTLSTESSVVLFGTLKLVPEGKTAPGGHELNVDYWELIGLAPPGG 225

  Fly   194 ADDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIISAAS 258
            ||..  ||.....|.:||||.:.:|......:.::.:.|.:.||.....:|:.|:..|.::....
  Fly   226 ADAI--LNEEAQPDVQLDNRHIMIRGENTSKVLKMRSVVTQAFRGHYEARGYNEVTPPTLVQTQV 288

  Fly   259 EGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLDLEM 323
            |||:.:|.:.||.:.|||.||.|||.:..:.|..| |:|:...:|||.|.|.|||.|:..::.|.
  Fly   289 EGGSTLFKLKYFGEEAYLTQSSQLYLETCLPALGD-VFTISQSYRAEQSRTRRHLAEYTHVEAEC 352

  Fly   324 AFKYHYHEVLHTIGNTFTSIFKGLRDKYAKEIESVGQQ---YKVDA----FKFLEPPL-ILQFAD 380
            .|.            ||..:...|.|.....::.|.:.   |.|..    ||..:.|. .:.:.|
  Fly   353 PFL------------TFDDLLDRLEDLVCDVVDRVLKSPWGYLVKELNPDFKPPQKPFRRMNYED 405

  Fly   381 GVAMLREAGVETGD------EEDL-STPNEKLLGRLVKAKYDTDFYILDKFPLAIRPFYTMPDPN 438
            .:..|:|..|...|      .||: ..|..|:...:      .:..:|.:||..|:.||......
  Fly   406 AIKWLKENNVTKDDGTFYEFGEDIPEAPERKMTDTI------NEPIMLCRFPAEIKSFYMQRCKE 464

  Fly   439 NPVYSNSYDMFMRG-EEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGGGIG 502
            :...:.|.|:.:.. .||:.|:.||:|.|.|::..|..|||......|.:...||..||.|.|:|
  Fly   465 DQRLTESVDVLLPNVGEIVGGSMRIYDSEELLKGYKREGIDPQPYYWYTDQRVYGTMPHGGYGLG 529

  Fly   503 MERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
            :||.:...|...:||:..::||...|..|
  Fly   530 LERFLCWLLNRYHIREVCLYPRFLDRCRP 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRSNP_001260930.1 PLN02850 49..531 CDD:215456 128/513 (25%)
AspRS_cyto_N 89..187 CDD:239815 23/113 (20%)
AsxRS_core 203..527 CDD:238399 95/339 (28%)
AsnRSNP_001260561.1 AsnS 122..558 CDD:223096 128/508 (25%)
AsnRS_cyto_like_N 137..219 CDD:239818 24/133 (18%)
AsxRS_core 233..552 CDD:238399 94/337 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473206
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0017
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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