DRSC/TRiP Functional Genomics Resources

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Protein Alignment AspRS and nars-1

DIOPT Version :9

Sequence 1:NP_001260930.1 Gene:AspRS / 36420 FlyBaseID:FBgn0002069 Length:531 Species:Drosophila melanogaster
Sequence 2:NP_001021405.1 Gene:nars-1 / 172442 WormBaseID:WBGene00003815 Length:545 Species:Caenorhabditis elegans


Alignment Length:552 Identity:158/552 - (28%)
Similarity:244/552 - (44%) Gaps:73/552 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KEQVANGEQVSKKGAKKLAKAAKKAEQKAENASTAAANNAGGDSAEDHAAGRYGLSE---MIQSK 66
            |::...||.........:.||.||.|.:.:....|.......:.|: |||    |.|   :..|.
 Worm    42 KKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKEAEEAQ-HAA----LEEAKKITFSL 101

  Fly    67 DKR-SERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQ-CFLILRQQSSTVQCILAVGDVISKQ 129
            ||. .|...:.:.| |.|.....|.::..||..|.:||. .||:||.....:||:|  .|.:.:.
 Worm   102 DKSLPEAKVIKIGE-SVQHRDQRVSIKAWVHRLRRQGKSLMFLVLRDGYGFLQCVL--NDKLCQS 163

  Fly   130 MVKFAGNIPKESIID----IQAKPVAVSSKIESCTEQSLELSVEQIFVISQAKAQLPLQIEDASR 190
            .  .|..:..|:.:.    |:|.|...|:      ....||:|:...||.:|.|           
 Worm   164 Y--DAVTLSTETSVQVYGIIKALPDGKSA------PDGHELTVDYWEVIGKAPA----------- 209

  Fly   191 PENADDAEGLNIRVNQDTRLDNRVLDLRTPANQAIFRLEAGVCRLFRDILTEQGFTEIHTPKIIS 255
             ...|:.  ||.....|..||||.|.:|......|.|:.|...|..||.....|:||:..|.::.
 Worm   210 -GGIDNV--LNESAGVDVMLDNRHLVIRGENASRILRIRAAATRAMRDHFFAAGYTEVAPPTLVQ 271

  Fly   256 AASEGGANVFTVSYFKDSAYLAQSPQLYKQMAIAADFDKVYTVGAVFRAEDSNTHRHLTEFVGLD 320
            ...|||:.:|.:.|:.:.|||.||.|||.:...||..| ||.:...:|||.|.|.|||:|:..::
 Worm   272 TQVEGGSTLFGLDYYGEPAYLTQSSQLYLETCNAALGD-VYCISQSYRAEKSRTRRHLSEYQHVE 335

  Fly   321 LEMAFKYHYHEVLHTI-GNTFTSIFKGLRDKYAKE-IESVGQQYKVDAFKFLEPPLILQFADGVA 383
            .|.|| ..:.:::..| .....::.:.|.|...|. ||.|...||..|..|...|    :.:.:.
 Worm   336 AECAF-ITFDQLMDRIEALVCDTVDRLLADPVTKSLIEFVNPGYKAPARPFKRMP----YKEAIE 395

  Fly   384 MLREAGV--ETGDE----EDLSTPNEKLLGRLVKAKYDTDF----YILDKFPLAIRPFYTMP--- 435
            .|::..|  |.|::    ||::...|:.:         ||.    .:|::||..|:.|| ||   
 Worm   396 WLQKNDVRNEMGEKFVYGEDIAEAAERRM---------TDTIGVPILLNRFPHGIKAFY-MPRCA 450

  Fly   436 DPNNPVYSNSYDMFMRG-EEILSGAQRIHDPEYLIERAKHHGIDTSKIAAYIESFRYGCPPHAGG 499
            |.|.  .:.|.|:.|.| .||:.|:.||...:.|:...:..|:|:.....|::..:||..||.|.
 Worm   451 DDNE--LTESVDLLMPGVGEIVGGSMRIWKEDQLLAAFEKGGLDSKNYYWYMDQRKYGSVPHGGY 513

  Fly   500 GIGMERVVMLYLGLDNIRKTSMFPRDPKRLTP 531
            |:|:||.:......::||...::||...|..|
 Worm   514 GLGLERFICWLTDTNHIRDVCLYPRFVGRCAP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AspRSNP_001260930.1 PLN02850 49..531 CDD:215456 148/506 (29%)
AspRS_cyto_N 89..187 CDD:239815 27/102 (26%)
AsxRS_core 203..527 CDD:238399 104/339 (31%)
nars-1NP_001021405.1 AsnS 108..545 CDD:223096 138/479 (29%)
AsnRS_cyto_like_N 123..206 CDD:239818 25/92 (27%)
AsxRS_core 220..541 CDD:238399 104/338 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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