DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmda1 and AT4G14730

DIOPT Version :9

Sequence 1:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_193209.2 Gene:AT4G14730 / 827126 AraportID:AT4G14730 Length:235 Species:Arabidopsis thaliana


Alignment Length:222 Identity:67/222 - (30%)
Similarity:126/222 - (56%) Gaps:15/222 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 DDQSIRRGFIRKVYLILMGQLIVTFGAVALFVYHEGTKTF---ARNNMWLFWVALGVMLVTMLSM 166
            :...:|..||||:|.||..||:||.|..|:..:......|   ....:.:|:|   ::|:.:|.:
plant    20 ESSELRWAFIRKLYSILSLQLLVTVGVSAVVYFVRPIPEFITETHRGLAVFFV---ILLLPLLLL 81

  Fly   167 ACCESVRRQTPTNFIFLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIF---ALQTK 228
            ....:..::.|.|.|.|.:||.:.||.:|:..:....:.||.|..:||.:...|||:   |::..
plant    82 WPLLAFEKKHPINCIVLSIFTLSISFSVGICCSLSQGRIVLEAAILTAVMVFGLTIYTFWAVKRG 146

  Fly   229 YDFTMMGGILIACMVVFLIFGIVAIF-VKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSI 292
            :||:.:|..|...:::.|:|.::.|| ..||:.:::::.|.:::|..|:|:||..::     ..:
plant   147 HDFSFLGPFLFGALLIILVFTLLQIFHPLGKLSSMIFSGIASIVFCGYIIFDTNQLI-----KKL 206

  Fly   293 SPEEYIFAALNLYLDIINIFMYILTII 319
            :.:|||.||:.||||::|:|:.:|.||
plant   207 NYDEYITAAIRLYLDVMNLFLSLLGII 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 67/222 (30%)
AT4G14730NP_193209.2 BI-1-like 9..235 CDD:320991 67/222 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 127 1.000 Domainoid score I1747
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1887
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - mtm996
orthoMCL 1 0.900 - - OOG6_100360
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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