DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmda1 and Tmbim7

DIOPT Version :10

Sequence 1:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_083417.1 Gene:Tmbim7 / 75010 MGIID:1922305 Length:302 Species:Mus musculus


Alignment Length:247 Identity:100/247 - (40%)
Similarity:156/247 - (63%) Gaps:9/247 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PPSAGGYGAY-----DD--PESQPKNFS--FDDQSIRRGFIRKVYLILMGQLIVTFGAVALFVYH 138
            |.:..|...|     :|  |.::..|.|  |::.|||..||.||:::|..||.:|...:.:||:.
Mouse    55 PRNRDGANTYAVQVSEDVTPSNETVNQSIPFENTSIRNDFIMKVFVVLSIQLFITAVIIGIFVFC 119

  Fly   139 EGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFIFLGLFTAAQSFLMGVSATKYAP 203
            |..:.:.....|..:..|..:::.:..:|||..:|||.|.|:|.|..||..:..|:|..:..|..
Mouse   120 EPVRKWVIAKPWFLYALLPAVMILIFVLACCRDIRRQVPANYILLAFFTILEGLLLGSLSVFYRA 184

  Fly   204 KEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMVVFLIFGIVAIFVKGKIITLVYASIG 268
            :|:|.|.|.|..|.|.||:||||||:|||::.|::.....|.||:||:|:.::...:.|||:::|
Mouse   185 EEILWAAGATTMVTLVLTLFALQTKWDFTLLNGVMFVFTSVLLIYGIIALVIRSYWLHLVYSALG 249

  Fly   269 ALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFMYILTIIG 320
            .||||:||:.|.|:|:||.:.|.|:||||||||||:|:|||::|::||.:||
Mouse   250 TLLFSIYLVMDVQMMVGGRYHYEINPEEYIFAALNIYVDIISLFIFILDLIG 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 92/218 (42%)
Tmbim7NP_083417.1 LFG_like 84..301 CDD:198410 91/216 (42%)

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