DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmda1 and TMBIM1

DIOPT Version :9

Sequence 1:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001308356.1 Gene:TMBIM1 / 64114 HGNCID:23410 Length:311 Species:Homo sapiens


Alignment Length:338 Identity:131/338 - (38%)
Similarity:184/338 - (54%) Gaps:48/338 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWQSVPQYPQYQDPNQQYNYGGGNPPQGGY-------GGYPPQGGYPP--QGPPQGYPPYAQGG 56
            ||..|.|  |.|:|.|..|   .|.||.|||       ||||...|||.  .|.|.|||      
Human     1 MSNPSAP--PPYEDRNPLY---PGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP------ 54

  Fly    57 AQPYPQPYGQGPPPGGYAPQPGFIQPPPSAGGYGAYDDPESQPKNFSF-----DDQSIRRGFIRK 116
             ||.|..:   |.|..|.|..|:              |.|.:..:.||     ||:.:|..||||
Human    55 -QPMPPTH---PMPMNYGPGHGY--------------DGEERAVSDSFGPGEWDDRKVRHTFIRK 101

  Fly   117 VYLILMGQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFI 181
            ||.|:..||::|...:|:|.:.|....|.|.|:.:::|:..|.:||.|.:|||:..||:.|.|.|
Human   102 VYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNII 166

  Fly   182 FLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMVVFL 246
            .|.|||.|..|:.|..::.|..|.|::|:.|||.|.:::|||..|||.|||...|:.....:|.|
Human   167 LLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLL 231

  Fly   247 IFGIVA----IFVKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLD 307
            :.|||.    .|.....:.::||::||:.|:::|.|||||:: |..|::||||:||..||.:|.|
Human   232 VTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQLVL-GNRKHTISPEDYITGALQIYTD 295

  Fly   308 IINIFMYILTIIG 320
            ||.||.::|.::|
Human   296 IIYIFTFVLQLMG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 93/225 (41%)
TMBIM1NP_001308356.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 17/40 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..72 11/31 (35%)
LFG_like 89..308 CDD:198410 91/219 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100360
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R158
SonicParanoid 1 1.000 - - X332
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.760

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