Protein Alignment Nmda1 and tmbim1a

DIOPT Version :10

• Sequence 1: NP_523722.1
• Gene: Nmda1 / 36419
• FlyBaseID: FBgn0013305
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001005992.2
• Gene: tmbim1a / 449819
• ZFINID: ZDB-GENE-041010-69
• Length: 332
• Species: Danio rerio
• Alignment Length: 341
• Identity: 138/341 - (40%)
• Similarity: 185/341 - (54%)
• Gaps: 34/341 - (9%)

  Fly     1 MSWQSVPQYPQYQDPNQQYNY--GGGNPPQG---GYGGYPPQGGYP-PQGPPQGYP--PYAQGGA 57
            ||....|  |.|.|.....|.  |.|.||..   |:..|..|.||| |..|.:|.|  ||.....
Zfish     1 MSRSDFP--PSYDDSRLLSNTQPGPGYPPSAPPYGFSPYEGQPGYPQPNDPYRGQPNDPYRGQPN 63

  Fly    58 QPY----PQPY-GQGPPPGGYAPQPGF----IQPPPSAGGYGAYDDPESQPKNFSFDDQSIRRGF 113
            .||    ..|| ||   |.|| |.|..    :.|||..|      |.|.......|:...:|..|
Zfish    64 DPYRGQPNDPYRGQ---PAGY-PPPAMPVIPVMPPPGIG------DSEGFTTAEGFESTDVRHSF 118

  Fly   114 IRKVYLILMGQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPT 178
            ||||||||..||:||...||:|.:.|....|.|.|..::||:..:..||.:.:.||:..||:.|.
Zfish   119 IRKVYLILAAQLLVTAAVVAIFTFVEPVGLFVRKNPAIYWVSYAIYFVTHIVLVCCQGPRRRFPW 183

  Fly   179 NFIFLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMV 243
            |.:.|.:||.|.||:.|..|:.|:.:.|.:|:.||..||:|:|:|..|||.|||...|......:
Zfish   184 NLLLLAIFTLALSFMTGNIASYYSTRAVFLALAITVVVCVAVTVFCFQTKVDFTKCSGFFCVLGI 248

  Fly   244 VFLIFGIV-AIFVKGKIIT---LVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNL 304
            |..:.||: ||.:..|.:.   ::||||||:.|:::|.|.|||:: |..|.|||||||:||||:|
Zfish   249 VVFVTGIITAIVLSFKYVPWLHMLYASIGAIAFTLFLAYHTQLLI-GNRKLSISPEEYVFAALSL 312

  Fly   305 YLDIINIFMYILTIIG 320
            |:||:.||:::|.|||
Zfish   313 YVDIVQIFIFLLQIIG 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmda1	NP_523722.1	LFG_like	103..320	CDD:198410	96/220 (44%)
tmbim1a	NP_001005992.2	DUF1373	18..>85	CDD:462093	27/70 (39%)
		LFG_like	108..328	CDD:198410	96/220 (44%)