DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nmda1 and CG9722

DIOPT Version :9

Sequence 1:NP_523722.1 Gene:Nmda1 / 36419 FlyBaseID:FBgn0013305 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_650341.1 Gene:CG9722 / 41724 FlyBaseID:FBgn0038209 Length:264 Species:Drosophila melanogaster


Alignment Length:242 Identity:135/242 - (55%)
Similarity:181/242 - (74%) Gaps:9/242 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GGYGAY------DDPESQPKNFSFDDQSIRRGFIRKVYLILMGQLIVTFGAVALFVYHEGTKTFA 145
            |.|.||      |||:   |...|...||||||||||||||:.|||.:...:......:..:...
  Fly    25 GRYTAYGSEIGQDDPD---KGLGFCSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMV 86

  Fly   146 RNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFIFLGLFTAAQSFLMGVSATKYAPKEVLMAV 210
            ..:.|:|.||:.:::.:::::.|.|.:|||||.|||||..||.|:|||:||:|.:|||.|:.|||
  Fly    87 AESTWIFVVAILIVVFSLVALGCNEDLRRQTPANFIFLSAFTIAESFLLGVAACRYAPMEIFMAV 151

  Fly   211 GITAAVCLALTIFALQTKYDFTMMGGILIACMVVFLIFGIVAIFVKGKIITLVYASIGALLFSVY 275
            .|||:|||.||:|||||:||||:|||:|::|:::.|.||||.|||.|.::|.:|||:.|||||||
  Fly   152 LITASVCLGLTLFALQTRYDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYASLSALLFSVY 216

  Fly   276 LIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFMYILTIIGAS 322
            |:|||||||||:|:||||||||||||||:|:|::|||:.||.:||.|
  Fly   217 LVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLIGGS 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nmda1NP_523722.1 LFG_like 103..320 CDD:198410 124/216 (57%)
CG9722NP_650341.1 LFG_like 44..261 CDD:198410 124/216 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439703
Domainoid 1 1.000 127 1.000 Domainoid score I1747
eggNOG 1 0.900 - - E1_COG0670
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1887
Isobase 1 0.950 - 0 Normalized mean entropy S1892
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D104229at33392
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - mtm6588
orthoMCL 1 0.900 - - OOG6_100360
Panther 1 1.100 - - P PTHR23291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X332
1211.750

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