Protein Alignment Nmda1 and grinab

DIOPT Version :9

• Sequence 1: NP_523722.1
• Gene: Nmda1 / 36419
• FlyBaseID: FBgn0013305
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001295540.1
• Gene: grinab / 394183
• ZFINID: ZDB-GENE-040426-1367
• Length: 337
• Species: Danio rerio
• Alignment Length: 322
• Identity: 135/322 - (41%)
• Similarity: 184/322 - (57%)
• Gaps: 31/322 - (9%)

  Fly    26 PPQGGYGGYPP------QGGYP--------PQGPPQGY--PPYAQGGAQPYP-QPYGQGPPPGGY 73
            ||..|: ..||      |.|:.        |.|||..:  |.|.| |...|| |||   |....|
Zfish    22 PPPPGF-VMPPAYEAAVQYGHADATVPVAVPVGPPYAFESPAYGQ-GVSGYPQQPY---PVAAPY 81

  Fly    74 APQPGFIQPPPSAGGYG----AYDDPESQPKNFS---FDDQSIRRGFIRKVYLILMGQLIVTFGA 131
            :..| :.||.|:....|    :.|.||.....|:   .|::.|||.|||||:.:|..||.:|...
Zfish    82 STDP-YSQPFPNVVAMGEPGQSNDPPEYDSDQFTSSGLDNKEIRRVFIRKVFSVLSLQLAITTAF 145

  Fly   132 VALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACCESVRRQTPTNFIFLGLFTAAQSFLMGV 196
            ||:|.:....|.|...|.|.:||...|.||....:.||...||:.|.|.|.|.:.|.|.|:::||
Zfish   146 VAIFTFEPHVKLFVMQNSWTYWVGYLVFLVPYFVILCCGEFRRKHPWNLICLSVLTLAMSYMVGV 210

  Fly   197 SATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMMGGILIACMVVFLIFGIVAIFVKGKIIT 261
            .::.|....|:||:|||..||..:.||::|||||||...|:|..|.:|..:|||:.|....||:.
Zfish   211 ISSFYDTDIVIMAIGITVVVCFTVIIFSMQTKYDFTSCYGVLFVCGIVLFVFGILCIIFYSKIMD 275

  Fly   262 LVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFMYILTIIGASR 323
            |:|:::|||||:.:|..||||::|.:: .|:||||||||:||||||||.||::||.|:|.||
Zfish   276 LIYSTLGALLFTCFLAVDTQLLLGNKN-LSLSPEEYIFASLNLYLDIIQIFLFILRILGRSR 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmda1	NP_523722.1	LFG_like	103..320	CDD:198410	101/219 (46%)
grinab	NP_001295540.1	LFG_like	119..333	CDD:198410	101/214 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	227	1.000	Domainoid score	I2436
eggNOG	1	0.900	-	-		E1_COG0670
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	268	1.000	Inparanoid score	I3002
OMA	1	1.010	-	-		QHG57711
OrthoDB	1	1.010	-	-		D1290306at2759
OrthoFinder	1	1.000	-	-		FOG0000200
OrthoInspector	1	1.000	-	-		mtm6588
orthoMCL	1	0.900	-	-		OOG6_100360
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X332
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	11	10.780