Protein Alignment Nmda1 and grina

DIOPT Version :9

• Sequence 1: NP_523722.1
• Gene: Nmda1 / 36419
• FlyBaseID: FBgn0013305
• Length: 324
• Species: Drosophila melanogaster
• Sequence 2: NP_001120085.1
• Gene: grina / 100145094
• XenbaseID: XB-GENE-5740104
• Length: 286
• Species: Xenopus tropicalis
• Alignment Length: 281
• Identity: 114/281 - (40%)
• Similarity: 166/281 - (59%)
• Gaps: 32/281 - (11%)

  Fly    71 GGYAPQPGFIQPPPS-----------------------AGGYGAYDDPESQPKNFS--------F 104
            ||....|.::.||||                       |..|..: |.|:.|..::        |
 Frog     2 GGGPSVPVYMPPPPSYSEQDPAALNAQINNPSSQIFLEANSYPEH-DAEAGPPEYTFGVVGSSPF 65

  Fly   105 DDQSIRRGFIRKVYLILMGQLIVTFGAVALFVYHEGTKTFARNNMWLFWVALGVMLVTMLSMACC 169
            .:.:|||.|||||||.|..||.:|.|.:.:|::.:..|.:.:...::.:.....:::..|.:|||
 Frog    66 SESAIRRAFIRKVYLTLAMQLALTVGLICMFIFWKRLKNWVQEYPYIVYALCPAIIILALVLACC 130

  Fly   170 ESVRRQTPTNFIFLGLFTAAQSFLMGVSATKYAPKEVLMAVGITAAVCLALTIFALQTKYDFTMM 234
            :.|||:.|.||||||||||.:..::|..|..:....|:.|.|.|..|.|.|||||||||:||||:
 Frog   131 QQVRRKVPYNFIFLGLFTAVEGCMLGTIAALFDADAVMWAGGATIVVTLGLTIFALQTKWDFTML 195

  Fly   235 GGILIACMVVFLIFGIVAIFVKGKIITLVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIF 299
            .|.|...::|.|.|||:...::...:.:||||||..:|.:||:.||||::||:|:|::|||||||
 Frog   196 SGGLCVALLVLLCFGILCGILRSMYLNIVYASIGTFIFGMYLVVDTQLIVGGKHRYAVSPEEYIF 260

  Fly   300 AALNLYLDIINIFMYILTIIG 320
            ||||:||||||:|:.:|.|.|
 Frog   261 AALNIYLDIINLFLMLLQIFG 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nmda1	NP_523722.1	LFG_like	103..320	CDD:198410	101/224 (45%)
grina	NP_001120085.1	DUF4526	<4..>55	CDD:291688	10/51 (20%)
		LFG_like	64..281	CDD:198410	101/216 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	221	1.000	Domainoid score	I2553
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1290306at2759
OrthoFinder	1	1.000	-	-		FOG0000200
OrthoInspector	1	1.000	-	-		otm47433
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R158
SonicParanoid	1	1.000	-	-		X332
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.040