DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lfg and AT4G02690

DIOPT Version :9

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_192178.1 Gene:AT4G02690 / 828203 AraportID:AT4G02690 Length:248 Species:Arabidopsis thaliana


Alignment Length:257 Identity:89/257 - (34%)
Similarity:138/257 - (53%) Gaps:32/257 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYH----YQQGD-ETGAYTDAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKA 60
            ||.    |::.| |||..:..........::..:|.|||||||.|:..|||.|....:..     
plant     1 MYQWNLPYRKDDVETGVSSRRPLLYPAMHENPELRWGFIRKVYSIIAFQLLATVAVAATV----- 60

  Fly    61 SQEWVQKNP-ALFW----IALA---VLIVTMICMAC-CESVRRKTPLNFIFLFLFTVAESFLLGM 116
                |...| |||:    :.||   |:|:|.:.:.| .....:|.|:|::.|.:||:|.:|::|:
plant    61 ----VTVRPIALFFATTGLGLALYIVIIITPLIVLCPLYYYHQKHPVNYLLLGIFTLALAFVVGL 121

  Fly   117 VAGQFEADEVLMAVGITAAVALGLTLF---ALQTKYDFTMCGGVLVACLVVFIIFGIIAIFIP-G 177
            .........:|.:|.:|:.|.|.|||:   |.:..|||...|..|...|.|.|.|.:|.|..| |
plant   122 TCAFTNGKVILESVILTSVVVLSLTLYTFWAARKGYDFNFLGPFLFGALTVLIFFALIQILFPLG 186

  Fly   178 KVIGLVYASLGALLFSVYLVYDTQLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTII 239
            :|..::|..|.:::|..|:||||..:: ..|.|    :|||:||::|||||||:|:|:||::
plant   187 RVSVMIYGCLVSIIFCGYIVYDTDNLI-KRHTY----DEYIWAAVSLYLDIINLFLYLLTVL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 82/230 (36%)
AT4G02690NP_192178.1 BI-1-like 31..247 CDD:412397 82/227 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 127 1.000 Domainoid score I1747
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 129 1.000 Inparanoid score I1887
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - mtm996
orthoMCL 1 0.900 - - OOG6_100360
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.780

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