DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lfg and BIL4

DIOPT Version :10

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_191890.1 Gene:BIL4 / 825506 AraportID:AT3G63310 Length:239 Species:Arabidopsis thaliana


Alignment Length:219 Identity:70/219 - (31%)
Similarity:121/219 - (55%) Gaps:9/219 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWVQKNPALFWIALAVLIVTMICMACC 89
            :...:|..||||||.|:..|||:|....:......:...:.....|.|.:.:.:::..:|.|...
plant    21 ESPELRWSFIRKVYSIISIQLLVTIAVAATVVKVHSISVFFTTTTAGFALYILLILTPLIVMCPL 85

  Fly    90 ESVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVALGLTLF---ALQTKYDF 151
            ....:|.|:|::.|.:||||.:|.:|:.........:|.:|.:||.|.:.|||:   |.:..:||
plant    86 YYYHQKHPVNYLLLGIFTVALAFAVGLTCAFTSGKVILESVILTAVVVISLTLYTFWAAKRGHDF 150

  Fly   152 TMCGGVLVACLVVFIIFGIIAIFIP-GKVIGLVYASLGALLFSVYLVYDTQLMLGGNHKYSISPE 215
            ...|..|...::|.::|..|.|..| ||:..::|..|.:::|..|:||||..:: ..|.|    :
plant   151 NFLGPFLFGAVIVLMVFSFIQILFPLGKISVMIYGCLASIIFCGYIVYDTDNLI-KRHSY----D 210

  Fly   216 EYIFAALNLYLDIINIFMYILTII 239
            |||:||::||||:||:|:.:||::
plant   211 EYIWAAVSLYLDVINLFLSLLTLL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 70/219 (32%)
BIL4NP_191890.1 BI-1-like 22..225 CDD:469783 65/207 (31%)

Return to query results.
Submit another query.