DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lfg and faim2

DIOPT Version :9

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001072357.1 Gene:faim2 / 779810 XenbaseID:XB-GENE-953203 Length:311 Species:Xenopus tropicalis


Alignment Length:251 Identity:106/251 - (42%)
Similarity:163/251 - (64%) Gaps:13/251 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YHYQQGD-------ETGAYT-DAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFS 58
            :.:|.|:       .:|.|: |.|...:.::|::::|:|||||||.|||.|||:|...|::|||.
 Frog    59 HSWQHGEPYNSPDCSSGIYSGDTEMLTTQSWDNETVRRGFIRKVYAILMIQLLVTVAVVALFTFC 123

  Fly    59 KASQEWVQKNPALFWIALAVLIVTMICMACCESVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEA 123
            ...:.::|.||..:|.:.||...|.:.:|||...|||.|.|.|.|.:||::.:::.||::..:..
 Frog   124 DPVKGYIQANPGWYWASYAVFFSTYLVLACCSGPRRKFPWNLILLCIFTLSMAYITGMLSSFYNT 188

  Fly   124 DEVLMAVGITAAVALGLTLFALQTKYDFTMCGGVLVACLVVFIIFGI-IAIFIPGKVI---GLVY 184
            ..|::.:||||.|.:.:|||:.|:|.|||.|.|||....:|.:..|| :.|.||.:.|   ..||
 Frog   189 KSVILCLGITALVCMSVTLFSFQSKIDFTSCQGVLFVLSMVLLFSGIFLVILIPFQYIPWLHAVY 253

  Fly   185 ASLGALLFSVYLVYDTQLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIG 240
            |.:||::|:::|.:||| ||.|:.:||:|||||||.|||:|||||.||.::|.:.|
 Frog   254 AVIGAIVFTMFLAFDTQ-MLMGSRRYSLSPEEYIFGALNIYLDIIYIFSFLLQLFG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 99/220 (45%)
faim2NP_001072357.1 LFG_like 88..308 CDD:198410 99/220 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - otm47433
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R158
SonicParanoid 1 1.000 - - X332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.960

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