DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lfg and Grina

DIOPT Version :10

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_075657.1 Gene:Grina / 66168 MGIID:1913418 Length:345 Species:Mus musculus


Alignment Length:218 Identity:107/218 - (49%)
Similarity:160/218 - (73%) Gaps:1/218 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWVQKNPALFWIALAVLIVTMICMACCE 90
            |::||:.|||||:|:|..||.:|...|::|||....:.:|::|...::::.|:..:::|.::||.
Mouse   128 DKNIRQAFIRKVFLVLTLQLSVTLSTVAIFTFVGEVKGFVRENVWTYYVSYAIFFISLIVLSCCG 192

  Fly    91 SVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVALGLTLFALQTKYDFTMCG 155
            ..|||.|.|.:.|.:.||:.|:::||:|..:..:.|:||||||.||...:.:|::||:||||.|.
Mouse   193 DFRRKHPWNLVALSILTVSLSYMVGMIASFYNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTSCM 257

  Fly   156 GVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSVYLVYDTQLMLGGNHKYSISPEEYIFA 220
            |||:..:||..||.|:.|||..:::.:||||||||||:.:|..||||:| ||.:.|:|||||:||
Mouse   258 GVLLVSVVVLFIFAILCIFIRNRILEIVYASLGALLFTCFLAVDTQLLL-GNKQLSLSPEEYVFA 321

  Fly   221 ALNLYLDIINIFMYILTIIGLSR 243
            |||||.||||||:|||||||.::
Mouse   322 ALNLYTDIINIFLYILTIIGRAK 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 105/213 (49%)
GrinaNP_075657.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..115
Pro-rich <10..114 CDD:464580
LFG_like 128..341 CDD:198410 105/213 (49%)
Blue background indicates that the domain is not in the aligned region.

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