DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lfg and BI-1

DIOPT Version :10

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_648205.1 Gene:BI-1 / 38936 FlyBaseID:FBgn0035871 Length:245 Species:Drosophila melanogaster


Alignment Length:90 Identity:18/90 - (20%)
Similarity:29/90 - (32%) Gaps:16/90 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEVATRIPKPVLRGLHNATIKRNLIVSGVLCTIAVVAMKVMHNDPKVRDYAEFYKTYDANK--- 62
            |.||..|    |...||..:....|....::..:|....|:...||.:..|.:.....:.:.   
  Fly   154 MQEVHPR----VHAALHKISYLIPLAPWNLVSILAQNMRKIDKKDPSIVTYVDNLLRLENSSIGE 214

  Fly    63 ---------AFQRMKDAGLLQSVKD 78
                     ..:||.|..|:....|
  Fly   215 VVGSVILMMVMERMLDLDLVSGCDD 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 11/68 (16%)
BI-1NP_648205.1 BI-1 21..233 CDD:198412 16/82 (20%)

Return to query results.
Submit another query.