DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lfg and CG33673

DIOPT Version :9

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001027218.2 Gene:CG33673 / 3772423 FlyBaseID:FBgn0053673 Length:235 Species:Drosophila melanogaster


Alignment Length:219 Identity:74/219 - (33%)
Similarity:129/219 - (58%) Gaps:3/219 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWVQKNPALFWIALAVLIVTMICMAC 88
            |:|:..|:.||.:|.:|:...||:|...::...|...:::::.|:..:..:.:.::::....:.|
  Fly    16 FEDRYSRRIFISRVLMIVAINLLVTTLIMTFCVFHMGARKFLLKHWYIGLVGMGIILIFSFMICC 80

  Fly    89 CESVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVALGLTLFALQTKYDFTM 153
            |..:.|.:|..:|.|.::.:|.|.::...|.:::...|.:||...||:.:.|.|||.....|||.
  Fly    81 CSFLFRSSPCKYILLVIYVLAHSTVVCSAAVRYQPKLVFIAVASCAAIVVMLCLFARFAPCDFTG 145

  Fly   154 CGGVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSVYLVYDTQLML-GGNHKYSISPEEY 217
            |...:....:|.:|.||:|||.|  .|.:||||||.|||.||:|.|.|::: ||.||......:|
  Fly   146 CWIFVFVLSLVVLIMGIVAIFFP--TIRIVYASLGVLLFCVYIVIDVQMIIGGGTHKNEFDESDY 208

  Fly   218 IFAALNLYLDIINIFMYILTIIGL 241
            :.||::||.||:.:|:|:|.:|||
  Fly   209 VLAAMSLYSDIVFLFLYLLDLIGL 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 71/216 (33%)
CG33673NP_001027218.2 LFG_like 16..231 CDD:198410 71/216 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439708
Domainoid 1 1.000 62 1.000 Domainoid score I575
eggNOG 1 0.900 - - E1_COG0670
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 67 1.000 Inparanoid score I411
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.900

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