Protein Alignment Lfg and Tmbim4

DIOPT Version :10

• Sequence 1: NP_725236.1
• Gene: Lfg / 36418
• FlyBaseID: FBgn0025692
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_954547.1
• Gene: Tmbim4 / 362884
• RGDID: 735173
• Length: 238
• Species: Rattus norvegicus
• Alignment Length: 240
• Identity: 87/240 - (36%)
• Similarity: 136/240 - (56%)
• Gaps: 21/240 - (8%)

  Fly    12 AYTDAEADKSFAFDDQS-----------IRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWV 65
            |.||....:|...||.:           ||..|:||||.||..|:|:|....::|.:.:..:.:|
  Rat     2 ADTDPRYPRSSIEDDFNYGSCVASASVHIRMAFLRKVYSILSLQVLLTTVTSALFLYFETLRTFV 66

  Fly    66 QKNPALFWIALAVLIVTMICMACCESVRRKT-PLNFIFLFLFTVAESFLLGMVAGQFEADEVLMA 129
            ..:|||    :.|..:..:.:....::.|.| |||...||.||::|:..:..|...::...||.|
  Rat    67 HDSPAL----IVVFALGSLGLIFALTLHRHTHPLNLYLLFAFTLSEALTVATVVTFYDGHLVLHA 127

  Fly   130 VGITAAVALGLTLFALQTKYDFTMCGGVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSV 194
            ..:||||.||||.:.||:|.||:..|..|.|||.:..:.|.:.:|...:.:.||.||||||||..
  Rat   128 FILTAAVFLGLTAYTLQSKRDFSKFGAGLFACLWILCLAGFLKVFFYSQTVELVLASLGALLFCG 192

  Fly   195 YLVYDTQLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTII 239
            :::|||..::     :.:|||||:.||::|||||||:|:::|..:
  Rat   193 FIIYDTHSLM-----HRLSPEEYVLAAISLYLDIINLFLHLLKFL 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lfg	NP_725236.1	LFG_like	23..240	CDD:198410	83/229 (36%)
Tmbim4	NP_954547.1	GAAP_like	6..236	CDD:198411	84/236 (36%)