DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lfg and LOC3289993

DIOPT Version :10

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_001688677.1 Gene:LOC3289993 / 3289993 VectorBaseID:AGAMI1_014682 Length:320 Species:Anopheles gambiae


Alignment Length:236 Identity:155/236 - (65%)
Similarity:191/236 - (80%) Gaps:2/236 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAYTDAEAD--KSFAFDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWVQKNPALFW 73
            ||..|.|..  |.|.|:|||||:|||||||.||..||.||.||:::|.:.:.::.|||.:|.:||
Mosquito    85 GAAYDPETGSVKGFEFNDQSIRRGFIRKVYSILTVQLAITLGFITLFLYHRPTKLWVQNHPEMFW 149

  Fly    74 IALAVLIVTMICMACCESVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEADEVLMAVGITAAVAL 138
            |||.|::||:|.||||..||||.|:|||||.|||:|::||||:....|.:.||::||||||||.|
Mosquito   150 IALGVMVVTLISMACCGDVRRKAPMNFIFLTLFTLAQAFLLGVTTANFSSQEVMLAVGITAAVCL 214

  Fly   139 GLTLFALQTKYDFTMCGGVLVACLVVFIIFGIIAIFIPGKVIGLVYASLGALLFSVYLVYDTQLM 203
            ||||||.|||:|||:.||:|...:::.::||:||||.|||.|.|||||.|||:||:|||||||||
Mosquito   215 GLTLFAFQTKWDFTVMGGILFVAVLILMLFGLIAIFFPGKTITLVYASAGALIFSIYLVYDTQLM 279

  Fly   204 LGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIGLSRN 244
            |||.|||||||||||||||||||||:|||:|||||||.||:
Mosquito   280 LGGEHKYSISPEEYIFAALNLYLDIVNIFLYILTIIGASRD 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 145/216 (67%)
LOC3289993XP_001688677.1 LFG_like 100..316 CDD:198410 145/215 (67%)

Return to query results.
Submit another query.