DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lfg and xbx-6

DIOPT Version :9

Sequence 1:NP_725236.1 Gene:Lfg / 36418 FlyBaseID:FBgn0025692 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001379309.1 Gene:xbx-6 / 179361 WormBaseID:WBGene00009580 Length:296 Species:Caenorhabditis elegans


Alignment Length:248 Identity:81/248 - (32%)
Similarity:142/248 - (57%) Gaps:6/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYHYQQGDETGAYTDAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWV 65
            |::..:..:.|...:.:...||.|.|:::|..|:|||:.::...|.|......:......:...|
 Worm    51 MFNQMENGQHGGGDNPDGKYSFQFSDKTVRAAFVRKVFSLVFIMLCIVAAVTVIPWVHDDTMRMV 115

  Fly    66 QKNPALFWIALAVLIVTMICMACCESVRRKTPLNFIFLFLFTVAESFLLGMVAGQFEADEVLMAV 130
            ::|.||:..:..:..||.:.:.|||.||||.|:|.|...:||:|.|.:..:::...:|:.||:|:
 Worm   116 RRNSALYLGSYVIFFVTYLSLVCCEGVRRKFPVNLIVTGIFTLATSVMTMVISAHHDANVVLLAL 180

  Fly   131 GITAAVALGLTLFALQTKYDFTMCGGVLVACLVVFIIFGIIAI----FIPGKVIGLVYASLGALL 191
            .|.......:.:.|.|||:|.|...|.::...:.|:.||::.:    |...|.:.:|||..|||:
 Worm   181 AICIGCTFSIVIVASQTKFDLTAHMGYILIISMCFMFFGLVVVICSMFFKIKFLMMVYALGGALI 245

  Fly   192 FSVYLVYDTQLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIGLSRN 244
            ..:||..|.|:::||. ||.|||||||||::.:::||:.:|.::|::.| |||
 Worm   246 MMLYLFLDVQMLMGGK-KYEISPEEYIFASVQIFIDIVQMFWFLLSLFG-SRN 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LfgNP_725236.1 LFG_like 23..240 CDD:198410 73/220 (33%)
xbx-6NP_001379309.1 LFG_like 74..293 CDD:198410 73/219 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 146 1.000 Domainoid score I2788
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 178 1.000 Inparanoid score I2681
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57711
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 1 1.000 - - FOG0000200
OrthoInspector 1 1.000 - - mtm4835
orthoMCL 1 0.900 - - OOG6_100360
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R158
SonicParanoid 1 1.000 - - X332
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.910

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