DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Balat and Sv2a

DIOPT Version :9

Sequence 1:NP_610823.1 Gene:Balat / 36417 FlyBaseID:FBgn0033778 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_071313.1 Gene:Sv2a / 64051 MGIID:1927139 Length:742 Species:Mus musculus


Alignment Length:634 Identity:119/634 - (18%)
Similarity:195/634 - (30%) Gaps:247/634 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LRQQAEDLLKLQPDTTQVVPCQHGWHYDKSIYSSTVVQEWNLVCDRSFLVTLALVVFGV------ 163
            |.||.|.:|:         .|.||..            :|.|.    |::.|||:..||      
Mouse   148 LAQQYETILR---------ECGHGRF------------QWTLY----FVLGLALMADGVEVFVVG 187

  Fly   164 --------------------------GGLLGNYVFGYLVDLWGRRPSFYAYLLLEIIACAASAFA 202
                                      |.::|.:::|.|.|..|||......|.:..:....|:|.
Mouse   188 FVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFV 252

  Fly   203 WNYYTWLGLRFVVGLTVPAILASPYVLAIELVGPERR--------VFCTIVSNIAYSLGLVVL-- 257
            ..|.|:|..|.:.|:.:...:...:....|.:..|:|        :|..|....|.::...::  
Mouse   253 QGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPH 317

  Fly   258 ------AGVIYIVRDWRELSLAVSMPLLMLFSCFFVLPESPRWLMAVGKTRRAIKILKVMARVNG 316
                  .|..|....||...|..:.|.:.........|||||:.:..||...|..:||.:...| 
Mouse   318 YGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTN- 381

  Fly   317 VRVNRDFVERL-----------QRKLVITRAAETKSSMTTHY---GILDLFRG------------ 355
            :|. :...||:           :.:|:     |.:|...|.|   |:..|..|            
Mouse   382 MRA-KGHPERVFSVTHIKTIHQEDELI-----EIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFS 440

  Fly   356 PNMRRKTLIITLIWFANTSVYVGLSYYAP----------------ALGGDEI----WNFFLAGAV 400
            |..||.||::..:||..:..|.||:.:.|                ...|:.:    :||.|...:
Mouse   441 PEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQI 505

  Fly   401 ELPTYLLLWPGLSYFGRRWI-------------------------------------------LF 422
            .        .|..||..::|                                           ||
Mouse   506 H--------RGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLF 562

  Fly   423 ISMLVGGVACVATFLYP------DIT----------------------------LLLYCVGKM-- 451
            ....|......:|||:.      |:|                            ||:..:|::  
Mouse   563 EYKFVNSRLVNSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRM 627

  Fly   452 --------------------------------GIS-SSFVVLPLMASELYPTVVRGLGMSFSSVI 483
                                            |:| :|:..|.::..||||:..|.....|.:.:
Mouse   628 LAGSSVLSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNAL 692

  Fly   484 SMVGPIV-IPMINHMGQQMLVLPLIVMGALLILGGFASLLLPETRNRNL 531
            ..:..:: |.:...........|::...|.|.||...:|.|||||.:.|
Mouse   693 CKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQVL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BalatNP_610823.1 MFS_SLC22 128..524 CDD:340875 106/602 (18%)
Sv2aNP_071313.1 synapt_SV2 1..742 CDD:130366 119/634 (19%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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