DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Balat and sv2ca

DIOPT Version :9

Sequence 1:NP_610823.1 Gene:Balat / 36417 FlyBaseID:FBgn0033778 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001121811.1 Gene:sv2ca / 562345 ZFINID:ZDB-GENE-060526-233 Length:745 Species:Danio rerio


Alignment Length:656 Identity:128/656 - (19%)
Similarity:215/656 - (32%) Gaps:270/656 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 RQQAEDLLKLQPDTTQVVPCQHGWHYDKSIYSSTVVQEWNLVCDRSFLVTLALV-----VFGVG- 164
            ||..|:.|..|.:.. :..|.||..            :|.|.    |.:.|||:     ||.|| 
Zfish   129 RQADEEELAQQYELI-IQECGHGRF------------QWQLF----FTLGLALMSDGVEVFVVGF 176

  Fly   165 ----------------GLLGNYVF----------GYLVDLWGRRP---------SFYAYLLLEII 194
                            |.||:.|:          |.:.|..|||.         .|:|:|     
Zfish   177 VLPSAETDMCVPDSSSGWLGSIVYLGMMVGAFFWGGMADKVGRRQCLLICMSLNGFFAFL----- 236

  Fly   195 ACAASAFAWNYYTWLGLRFVVGLTVPAILASPYVLAIELVGPERR--------VFCTI----VSN 247
                |:|...|..:|..|.:.|..:...:...:....|::..|:|        :|..|    .|.
Zfish   237 ----SSFVQGYGLFLLCRMIAGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGEIYASA 297

  Fly   248 IAYSL----GLVVLA-----------------GVIYIVRDWRELSLAVSMPLLMLFSCFFVLPES 291
            :|:::    |.:..|                 |..|....||...:..::|.:........:|||
Zfish   298 MAWAIIPHYGQITTASSQFINYHHYTSWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPES 362

  Fly   292 PRWLMAVGKTRRAIKILK------VMAR--------VNGVRVNR---DFVERLQRKLVITRAA-E 338
            ||:.:.|||...|..|||      :.||        ||.:::.:   :|||..:.....::|. .
Zfish   363 PRFYLEVGKHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKQIDEFVEMHESGNFFSKAIFR 427

  Fly   339 TKSSMTTHYGI----LDLFRGPNMRRKTLIITLIWFANTSVYVGLSYYAP----ALGGDE----- 390
            .|:.:   :||    |..|..| ::..|:.:.::|...:..|.|||.:.|    .|..||     
Zfish   428 IKTEL---HGIWLNFLKCFNYP-VKESTVKLAIVWLTLSFGYYGLSVWFPDVIKHLQNDEYASKG 488

  Fly   391 -----------IWNFFLAGAVELPT---------------------------------------- 404
                       .:||.|...:...:                                        
Zfish   489 QRHNNERIEDFTFNFTLENQIHTNSLFINDRFINMKFKSVTFINSTFQSCFFEDVTSVGSFFRNC 553

  Fly   405 -----------------------------------------YLLLW-------------PG---- 411
                                                     |...|             ||    
Zfish   554 TFIEAVFYNTDIDDSKLKNTDVINSTFYHNKTGCQMTFEDDYSAYWVYFVNFLGTLAVLPGNIVS 618

  Fly   412 ---LSYFGRRWILFISMLVGGVACVATFLY----PDITLLLYCVGKMGIS-SSFVVLPLMASELY 468
               :...||..:|..||::.|::|.  ||:    ..:.:.:.|:.. |:| |::..|.::.:|||
Zfish   619 ALLMDKIGRLSMLGFSMILSGISCF--FLWFGTSESMMIGMLCLYN-GLSISAWNSLDVVTTELY 680

  Fly   469 PTVVRGLGMSFSSVISMVGPIVIPMINHMGQQML--------VLPLIVMGALLILGGFASLLLPE 525
            ||..||.|..|.:.:..:..:       ||..:.        .:|:::..::|:.||...|.||:
Zfish   681 PTDRRGTGFGFCNALCKLAAV-------MGNLIFGSLVGITKAIPILLASSVLVGGGLVGLRLPD 738

  Fly   526 TRNRNL 531
            ||:..|
Zfish   739 TRSNVL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BalatNP_610823.1 MFS_SLC22 128..524 CDD:340875 116/625 (19%)
sv2caNP_001121811.1 synapt_SV2 3..745 CDD:130366 128/656 (20%)
Spt5_N 73..>141 CDD:288770 5/11 (45%)
MFS 157..>360 CDD:119392 40/215 (19%)
MFS 588..>711 CDD:119392 29/132 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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