DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and AT4G25780

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_194308.1 Gene:AT4G25780 / 828683 AraportID:AT4G25780 Length:190 Species:Arabidopsis thaliana


Alignment Length:256 Identity:54/256 - (21%)
Similarity:81/256 - (31%) Gaps:111/256 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QAFDYCDPTLCPGPERHIACNNFGALADICSPDAHIVRITTARRTMILNELNEYRDRIARGDLMG 85
            |.|..| ..||||                |..|:             |..|  :|..:.|.  ..
plant    36 QVFRIC-KNLCPG----------------CDHDS-------------LQFL--FRHNLVRA--AR 66

  Fly    86 FSPATRMATLQWDQELASFAE--LNVKR--CALVNDHCRNSEQFRNVAQVVAEG---GWQGDPLP 143
            |.|     .|.||:.|.::|:  .|.:|  |||  .|..::.:| |:.:.:..|   .|      
plant    67 FEP-----PLIWDRRLQNYAQGWANQRRGDCAL--RHSVSNGEF-NLGENIYWGYGANW------ 117

  Fly   144 PSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEY--KECSMRDIIAFSPPNNRILRLRVSKCI 206
              ||:                |.|:....|:.|..|  ..|.                  ..:..
plant   118 --SPA----------------DAVVAWASEKRFYHYGSNTCD------------------AGQMC 146

  Fly   207 AYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTNDVNAPVYQSGDRP 267
            .::||:|..||..|||     .:...:..|       .:||||:      :.|....|.:|
plant   147 GHYTQIVWKSTRRVGC-----ARVVCDNGG-------IFMTCNY------DPPGNYIGQKP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 41/194 (21%)
AT4G25780NP_194308.1 CAP_PR-1 54..190 CDD:349400 44/208 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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