DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and crispl

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_001025526.1 Gene:crispl / 594930 XenbaseID:XB-GENE-5768874 Length:314 Species:Xenopus tropicalis


Alignment Length:236 Identity:56/236 - (23%)
Similarity:84/236 - (35%) Gaps:76/236 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ARRTMILNELNEYRDRIARGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFR 126
            :.|..|||..||.| |.|.      .|.:.|..:.|       ::|..|..|...:.|:   |:.
 Frog   106 SNRQSILNVHNELR-RNAN------PPPSNMLKMVW-------SDLAAKSAAKWANSCK---QYH 153

  Fly   127 NVAQVVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMF-AEYKECSMRDII-A 189
            ::                       .||..||.         .:..|.:| |.|| .|..|:| |
 Frog   154 SL-----------------------KPERTIPG---------FSCGENLFMASYK-ASWEDVIRA 185

  Fly   190 FSPPNNRIL----RLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQ---YMT 247
            |.......|    ...|...|.:|||::..|:..|||.           |.|...:.|.   |..
 Frog   186 FYSEIEDFLYGKGAKEVGLQILHFTQVMWFSSWLVGCA-----------AAQCPITDHSLEFYFV 239

  Fly   248 CNFV---RTNDVNAPVYQSGDRPATECRSG-RNPVFINLCS 284
            |::.   ...:|..| |::| :|..:|:|. .|.:..|.|:
 Frog   240 CHYAPAGNYGNVGIP-YKTG-KPCEDCKSSCENGLCTNGCN 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 46/194 (24%)
crisplNP_001025526.1 CAP_CRISP 106..245 CDD:349402 46/199 (23%)
Crisp 261..314 CDD:369954 5/18 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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