DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and CG42564

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster


Alignment Length:273 Identity:85/273 - (31%)
Similarity:134/273 - (49%) Gaps:48/273 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DYCDPTLCPGPERHIACNNFGALADICSPDAHIVRITTARRTMILNELNEYRDRIARGDLMGFSP 88
            |||||:||....:|:|||....|.|.||.||.::.|:......:|...||.||.:|:|...|.||
  Fly    54 DYCDPSLCHKELKHVACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGFNGLSP 118

  Fly    89 ATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFRNVAQVVAEGGWQGDPLPPSSPSDPPNP 153
            |:||.||:|:.|||..||.||:.|.|.:|.|||::..:|..|.|...|.:|           ..|
  Fly   119 ASRMGTLKWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTVGYRGIKG-----------KLP 172

  Fly   154 EAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAF------SPPNNRILRLRVSKCIAYFTQL 212
            |.         :::::..:.....|....||.:|:.:      ||..|             |.|:
  Fly   173 EL---------EDILRDIIGVWLREKSRTSMVNIMKYVEQESQSPKYN-------------FLQI 215

  Fly   213 VRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTNDVNAPVYQSGDRPATECRSGRNP 277
            |.::...|||.|::|:::         ..:..:..||:.....|.:|||:.|.:.|..|::|.||
  Fly   216 VLENAESVGCAIVQQSRH---------GWIQTFFACNYGHAPVVGSPVYEPGKKAAESCKTGANP 271

  Fly   278 VFINLCSVNEIYD 290
            .:.:||:.:|:|:
  Fly   272 KYAHLCAESEVYE 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 52/191 (27%)
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 53/191 (28%)

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