DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and crispld1b

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_009296842.1 Gene:crispld1b / 393442 ZFINID:ZDB-GENE-040426-1204 Length:509 Species:Danio rerio


Alignment Length:289 Identity:65/289 - (22%)
Similarity:100/289 - (34%) Gaps:83/289 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 GALADICSPDAHIVRITTARRTMILNE------LNEYRDR--------------IARGD------ 82
            |.|.|:.|....:|.:.|....:|.|.      |.:|.|:              |::.|      
Zfish     4 GHLEDLFSGFVLLVTVQTVVSMVIPNATHLEAILEKYMDKDETWWQSKSRGKRAISQSDMQLILD 68

  Fly    83 ----LMG--FSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFRNVAQVVAEGGWQGDP 141
                |.|  :.||:.|..:.||.||...||.....|  :.:| ..|.....:.|.:  |...|..
Zfish    69 LHNKLRGQVYPPASNMEYMVWDTELERSAEHWAHTC--LWEH-GPSHLLTRIGQNL--GAHWGRD 128

  Fly   142 LPPSSPSDPPNPEAPIPVEYHTE---DEVIKATLEQMFAEYKECSMRDIIAFSPPNNRILRLRVS 203
            .||:               :|.:   |||    .:..:...:||:.......|.|          
Zfish   129 RPPT---------------FHVQAWYDEV----RDFSYPYPQECNPHCPYRCSGP---------- 164

  Fly   204 KCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTND--VNAPVYQSGDR 266
             ...::||||..::..:||.|  ......|..|...:.. .|:.||:....:  .:|| |:.| .
Zfish   165 -VCTHYTQLVWATSNKIGCAI--NVCYNMNVWGMIWAKA-VYLVCNYSPPGNWWGHAP-YKHG-T 223

  Fly   267 PATECRSGRNPVFINLCSVNEIY--DSSN 293
            |.:.|    .|.:...|..|..|  |.||
Zfish   224 PCSAC----PPSYGGGCRNNLCYKDDGSN 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 45/220 (20%)
crispld1bXP_009296842.1 SCP_euk 64..208 CDD:240180 39/181 (22%)
LCCL 301..385 CDD:128866
LCCL 404..501 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585729
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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