DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and Clec18a

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_038954172.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:238 Identity:55/238 - (23%)
Similarity:80/238 - (33%) Gaps:98/238 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TKWPPLLLLLM-LLG---QQLQAFDYCDPTLCPGPERHIACNNFGALADICSPDAHIVRITTARR 64
            ::|..|||||: |||   .::|      |...|                   ....||:..:.:.
  Rat    35 SRWLGLLLLLLPLLGITWTEVQ------PPQLP-------------------KQVPIVQALSRKE 74

  Fly    65 T-MILNELNEYRDRIARGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNS------ 122
            : :||...|..|.::       ...|..|..:.|.:.||..|:   .|.||    |..|      
  Rat    75 SFLILTTHNRLRSQV-------HPSAANMQRMDWSESLAQLAQ---ARAAL----CGTSATPNLA 125

  Fly   123 EQFRNVAQVVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAE---YK---- 180
            ...||...|    ||....||..|.|..               ||:..    .|||   |:    
  Rat   126 ATLRNTPDV----GWNVQLLPMGSASFV---------------EVVNV----WFAEGLQYRHGSA 167

  Fly   181 ECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCG 223
            ||:..                 :.| |::||||..:::.:|||
  Rat   168 ECAHN-----------------ATC-AHYTQLVWATSSQLGCG 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 41/174 (24%)
Clec18aXP_038954172.1 CAP_euk 77..211 CDD:349399 41/171 (24%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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