DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-19

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_507654.2 Gene:scl-19 / 191308 WormBaseID:WBGene00013971 Length:207 Species:Caenorhabditis elegans


Alignment Length:222 Identity:46/222 - (20%)
Similarity:73/222 - (32%) Gaps:72/222 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RTMILNELNEYRDRIARGDLMGFS-------PATRMATLQWDQELASFAELNVKRCALVNDHCRN 121
            |..:|:..|:.|.::|.|   .||       ||..|..|.:.|:....|:..|..|         
 Worm    23 RQQVLDFHNKLRSQVALG---VFSANGTIKPPARNMERLTYGQQFERLAQDYVADC--------- 75

  Fly   122 SEQFRNVAQVVAEGGWQGDPLPPSSPSDPPNPEAP----IPVEYHTE--DEVIKATLEQMFAEYK 180
                                        |...|.|    |.:.|:|.  ||...:     ..||.
 Worm    76 ----------------------------PDGLEIPIGRNIGMNYYTTKVDETYNS-----MDEYV 107

  Fly   181 ECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQY 245
            ..::.|.......|..:..:.....|:..:|:|...|.:||||:.|            ...::..
 Worm   108 IDALNDWAEEFQVNGWLSTIYNDTSISAASQMVWAGTKYVGCGVKR------------CDPINVV 160

  Fly   246 MTCNFVRT-NDVNAPVYQSGDRPATEC 271
            :.|.:.:. |.|..|:|:.|. |.|.|
 Worm   161 VVCMYYQQGNLVGRPIYKEGP-PCTAC 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 38/198 (19%)
scl-19NP_507654.2 SCP 21..167 CDD:214553 38/200 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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