DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-17

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_493975.1 Gene:scl-17 / 190174 WormBaseID:WBGene00021780 Length:246 Species:Caenorhabditis elegans


Alignment Length:236 Identity:43/236 - (18%)
Similarity:77/236 - (32%) Gaps:95/236 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LNELNEYRDRIARGDLMG----FSPATRMATLQWDQELASFAELNVKRCALVND----------- 117
            |:..||:|..||:|..:.    .:|||.:..::|:..:|:.|:.:..:|...:|           
 Worm    28 LDAHNEFRSSIAKGTYVTKGLLHAPATNIMKMKWNVTIATAAQNHANKCPKGHDGPLEGVSGECM 92

  Fly   118 ---HCRNSEQFRNVAQVVAEG--------GWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKAT 171
               |...|:...::..|.|:.        ||:.|.:                     .||...  
 Worm    93 WSGHINASKGVNHLGAVAAKAWSSEYTKKGWETDVM---------------------SDEFFN-- 134

  Fly   172 LEQMFAEYKECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAG 236
                               |...:.|:       :.:::|:      :||||:    |....|..
 Worm   135 -------------------SGVGHAII-------MTWYSQV------NVGCGV----KLCQKEGD 163

  Fly   237 QSLSSVHQYMTCNFVRTNDVNAPV-YQSGDR-----PATEC 271
            ..|:.|    .|.:......|..: |:||..     |.|.|
 Worm   164 YQLAIV----VCKYWGEGQGNGKIMYESGPTCSACPPNTTC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 36/207 (17%)
scl-17NP_493975.1 CAP_euk 25..174 CDD:349399 36/208 (17%)

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