DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-21

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_507793.1 Gene:scl-21 / 189870 WormBaseID:WBGene00012816 Length:198 Species:Caenorhabditis elegans


Alignment Length:238 Identity:48/238 - (20%)
Similarity:79/238 - (33%) Gaps:85/238 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ILNELNEYRDRIA-------RGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQ 124
            |:..:|:.|..:|       ..|:....||:.|..:.|:..||..|:...|.|.:..:.......
 Worm    26 IVTYINDLRSLVASRRFHLDSRDVETLPPASDMLKMTWNSTLAVAAQKLAKTCFIAVESSSPGIA 90

  Fly   125 FRNV--AQVV-----AEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKEC 182
            .:.:  |.||     |.|.|                               |.:|.      ||.
 Worm    91 DKRIVAANVVTVAKNALGHW-------------------------------KHSLN------KEW 118

  Fly   183 SMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMT 247
            :::..      |:..:.:          ||:...::.||||.   :....:..|:....|    .
 Worm   119 NLKSY------NSNYIGI----------QLIWAKSSSVGCGF---SPCEIDSQGRRWYKV----V 160

  Fly   248 CNFVRTNDV-NAPVYQSGDR----PA-TECRSGRNPVFINLCS 284
            |:|.:...: ..|||:.|..    || |:|.||.     .|||
 Worm   161 CSFEKKGGITREPVYKKGKACEACPAGTKCASGS-----VLCS 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 34/196 (17%)
scl-21NP_507793.1 CAP_euk 23..163 CDD:349399 34/196 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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