DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-1

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:248 Identity:50/248 - (20%)
Similarity:87/248 - (35%) Gaps:64/248 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RITTARRTMILNELNEYRDRIARGDLMG----FSPATRMATLQWDQELASFAELNVKRCALVNDH 118
            :.|:..::.|::..|:.|..||:...:.    ..|||.|..:..|..:|:.|:.....|.  ..|
 Worm    15 QFTSTGQSSIVDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCP--TGH 77

  Fly   119 CRNSEQFRNVAQVVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECS 183
            .:.:....|:.       |........|              ..:..|:..|..|:.|.:     
 Worm    78 SKGTGYGENLY-------WSWTSADVGS--------------LDSYGEIAAAAWEKEFQD----- 116

  Fly   184 MRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAG----QSLSSVHQ 244
                  |...:|.:.....:..|.:.||:...:|:.:|||:    ||...:|.    ..::.|.|
 Worm   117 ------FGWKSNAMDTTLFNSGIGHATQMAWANTSSIGCGV----KNCGRDASMRNMNKIAVVCQ 171

  Fly   245 YMTCNFVRTNDVNAPVYQSGDRPATECRSGRNPVFINLCSVNEIYD-SSNLAG 296
            |....    |.:..|:|:.|    |.|.|         ||.:...| :|.|.|
 Worm   172 YSPPG----NTMGRPIYKEG----TTCSS---------CSGSTKCDTASGLCG 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 36/193 (19%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 36/192 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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