DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-14

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_502532.1 Gene:scl-14 / 184246 WormBaseID:WBGene00008625 Length:208 Species:Caenorhabditis elegans


Alignment Length:239 Identity:44/239 - (18%)
Similarity:82/239 - (34%) Gaps:81/239 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RITTARRTMILNELNEYRDRIARGDLMGFS----PATRMATLQWDQELASFAELNVKRCALVNDH 118
            :.|...:..|||..|..|.|||:|..:...    .|:.|..::|.:.||:.:::...||...:.:
 Worm    18 QFTANGQAAILNVHNTLRSRIAKGTYVARGTVKHAASDMLKMKWLRSLATSSQIYANRCPTGHSN 82

  Fly   119 ----------------CRNSEQFRNVAQVVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEV 167
                            ..|.:||    ..:|...|                              
 Worm    83 MIGVGENLYWYWTSGTITNIDQF----GAMASAAW------------------------------ 113

  Fly   168 IKATLEQMFAEYKECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTT 232
                 |:.|.:|...|           |.:.....:..:.:.||:....|..:|||:    ||  
 Worm   114 -----EKEFQDYGWSS-----------NTLTMSLFNSGVGHATQMAWAKTNLIGCGV----KN-- 156

  Fly   233 NEAGQSLSSVHQY-MTCNF-VRTNDVNAPVYQSGDRPATECRSG 274
              .|...:.:::. :.|:: .:.|.:|..:|.|| ...::|.:|
 Worm   157 --CGMDTNGMNKVAVVCHYQPQGNYLNQNIYTSG-TTCSKCPAG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 36/206 (17%)
scl-14NP_502532.1 SCP 22..175 CDD:214553 36/210 (17%)

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