DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-15

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_494496.1 Gene:scl-15 / 184099 WormBaseID:WBGene00017183 Length:207 Species:Caenorhabditis elegans


Alignment Length:236 Identity:43/236 - (18%)
Similarity:78/236 - (33%) Gaps:76/236 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 RITTARRTMILNELNEYRDRIARGDLMG----FSPATRMATLQWDQELASFAELNVKRCALVNDH 118
            :.:.|.:..|::..|..|..||:|..:.    ..|.:.:..::||..:|..|:.....|...:..
 Worm    18 QFSKAGQKAIVDAHNTLRSSIAKGTYVANKTRKEPGSNILKMKWDPTIAKSAQAYANTCPTGHGK 82

  Fly   119 CRNSEQ--FRNVAQVV---------AEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATL 172
            .:..|.  :|....|:         |.|.|..:                                
 Worm    83 SKYGENLYWRWSGAVIKSIDDYGVRASGAWASE-------------------------------- 115

  Fly   173 EQMFAEYKECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQ 237
               |.:|           ....|::........|.:.||:...||..:|||:    ||    .|.
 Worm   116 ---FQKY-----------GWKTNKLDSALFKTGIGHATQMAWASTGSIGCGV----KN----CGM 158

  Fly   238 SLSSVHQY-MTCNF-VRTNDVNAPVYQSGDR----PA-TEC 271
            ..:.:::. :.|.: .|.|.:|..:|.:|..    || |:|
 Worm   159 DKNKMYKVAVVCQYSARGNMINNNIYTAGKTCSACPAKTKC 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 33/201 (16%)
scl-15NP_494496.1 SCP 22..173 CDD:214553 34/204 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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