DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-26

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_504963.1 Gene:scl-26 / 183662 WormBaseID:WBGene00016821 Length:208 Species:Caenorhabditis elegans


Alignment Length:222 Identity:39/222 - (17%)
Similarity:84/222 - (37%) Gaps:63/222 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 NEYRDRIARG--DLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFRNVAQVVAE 134
            |:.|:..::|  .....|.:|.|..|.|:..|.:.|:..:..|          :|.......:.|
 Worm    35 NKLRNDASQGLWARHNISKSTDMQKLFWNNSLVAEAKHEMYDC----------DQLEKRELTLGE 89

  Fly   135 GGWQGDPLPPSSPSDPPNPEAPIPVEYH----TEDEVIKATLEQMFAEYKECSMRDIIAFSPPNN 195
            ..:|.| :......|....||.|..:.|    ::|:.         |:|                
 Worm    90 NIYQYD-VTTYDDVDGQQGEAAINKDSHDALSSKDQA---------AQY---------------- 128

  Fly   196 RILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNF-VRTNDVNAP 259
               |||         |::...:..:||  :.::.:..::.|.:.::  :::.|.: ....:::..
 Worm   129 ---RLR---------QILYSKSNSIGC--IYESCDRIDDEGTNYNT--RFIICKYSPALKNIDDQ 177

  Fly   260 VYQSGDRPATECRSG---RNPVFINLC 283
            :|:.|:...:.|.||   .:|: :.||
 Worm   178 LYEEGEEACSNCPSGTSCTDPM-MKLC 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 31/183 (17%)
scl-26NP_504963.1 CAP_euk 30..168 CDD:349399 31/184 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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