DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-6

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:229 Identity:41/229 - (17%)
Similarity:80/229 - (34%) Gaps:65/229 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 TTARRTMILNELNEYRDRIARG--DLMG-FSPA-TRMATLQWDQELASFAELNVKRCAL------ 114
            :::.:..|::..|.:|.::|.|  .:.| ..|| :.:..:.||..||:.|:.....|..      
 Worm    21 SSSTQQFIVDLHNSFRSKLATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTGFSNTQ 85

  Fly   115 ---VNDHCRNSEQFRNVAQVVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMF 176
               .|.:.|.:.  .|::.:...||                              ....:.||.|
 Worm    86 GTGENLYWRTTS--ANISGLDIYGG------------------------------AASVSWEQEF 118

  Fly   177 AEYKECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSS 241
            .:|...:           |...:......:...||:....|..||||:....|::|     .|:.
 Worm   119 QKYGWAT-----------NYFSQELFDTGVGNGTQMAWAKTNLVGCGVKNCGKDST-----GLNK 167

  Fly   242 VHQYMTCNFVRTND-VNAPVYQSGDRPATECRSG 274
            |  .:.|::..... |:..:|.:| ...::|.:|
 Worm   168 V--AVVCHYKPLGRYVDQMIYTAG-FTCSQCPTG 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 36/198 (18%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 36/202 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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