DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and scl-5

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:259 Identity:52/259 - (20%)
Similarity:80/259 - (30%) Gaps:86/259 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LCPGPERHIACNNFGALADICSPDAHIVRITTARRTMILNELNEYRDRIARGDLMGFS----PAT 90
            ||.|.....:.|...|                     |||..|..|.|||:|..:...    .|:
 Worm    11 LCAGAYAQFSANGQAA---------------------ILNVHNTLRSRIAKGTYVAKGTAKPAAS 54

  Fly    91 RMATLQWDQELASFAELNVKRCALVNDHCR----------NSEQFRNVAQVVAEGGWQGDPLPPS 145
            .|..::||..:|:.|:....:|...:....          .|....|:.|..|.|          
 Worm    55 DMLKMKWDATVAASAQAYANKCPTGHSGAAGLGENLYWYWTSATITNIDQFGATG---------- 109

  Fly   146 SPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNRILRLRVSKCIAYFT 210
                                   .|..|:.|.:|...|           |.:.....:..|.:.|
 Worm   110 -----------------------SAAWEKEFQDYGWSS-----------NTLSMSLFNTGIGHAT 140

  Fly   211 QLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRTNDVNAPVYQSGDRPATECRSG 274
            |:....|..:|||:....|:|  .....::.|.||..    :.|.:|..:|.|| ...::|.||
 Worm   141 QMAWAKTNLIGCGVKNCGKDT--NGFNKVTVVCQYKP----QGNYLNQNIYTSG-TTCSKCPSG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 39/199 (20%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 41/219 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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