DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and lon-1

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_498166.1 Gene:lon-1 / 175753 WormBaseID:WBGene00003055 Length:312 Species:Caenorhabditis elegans


Alignment Length:234 Identity:46/234 - (19%)
Similarity:75/234 - (32%) Gaps:63/234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ILNELNEYRDRIARGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFRNVAQV 131
            |.:|.|.||..:         ||:.|..|.|..|||:.|:.:...|..     |:|....||.:.
 Worm    84 ITHEHNRYRRMV---------PASDMNMLYWSDELAASAQRHADTCDF-----RHSRGRINVGEN 134

  Fly   132 VAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNR 196
            :    |                .||    |....:.|.....::......|:.            
 Worm   135 I----W----------------AAP----YSNYSDAISIWFNEVHNPRCGCNH------------ 163

  Fly   197 ILRLRVSKCIAYFTQLVRDSTTHVGCGI--LRQTKNTTNEAGQSLSSVHQYMTCN--FVRTND-- 255
                ....|..::.|:|...|..||||.  .|..:.......:::...|.....|  ||....  
 Worm   164 ----AYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQGVWGRGHRNVFVCHYNPQGNTVFVTARGQL 224

  Fly   256 --VNAPVYQSGDR-PATECRSGRNPVFINLCSVNEIYDS 291
              :.|..:.|||. ..:.|.:.....:..||.:.:.|::
 Worm   225 YAMPAFTWASGDNGKCSNCPANAPACYQGLCYMPKNYEA 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 36/186 (19%)
lon-1NP_498166.1 SCP 81..211 CDD:214553 35/180 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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