DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and lon-1

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_498166.1 Gene:lon-1 / 175753 WormBaseID:WBGene00003055 Length:312 Species:Caenorhabditis elegans


Alignment Length:234 Identity:46/234 - (19%)
Similarity:75/234 - (32%) Gaps:63/234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 ILNELNEYRDRIARGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSEQFRNVAQV 131
            |.:|.|.||..:         ||:.|..|.|..|||:.|:.:...|..     |:|....||.:.
 Worm    84 ITHEHNRYRRMV---------PASDMNMLYWSDELAASAQRHADTCDF-----RHSRGRINVGEN 134

  Fly   132 VAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNNR 196
            :    |                .||    |....:.|.....::......|:.            
 Worm   135 I----W----------------AAP----YSNYSDAISIWFNEVHNPRCGCNH------------ 163

  Fly   197 ILRLRVSKCIAYFTQLVRDSTTHVGCGI--LRQTKNTTNEAGQSLSSVHQYMTCN--FVRTND-- 255
                ....|..::.|:|...|..||||.  .|..:.......:::...|.....|  ||....  
 Worm   164 ----AYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQGVWGRGHRNVFVCHYNPQGNTVFVTARGQL 224

  Fly   256 --VNAPVYQSGDR-PATECRSGRNPVFINLCSVNEIYDS 291
              :.|..:.|||. ..:.|.:.....:..||.:.:.|::
 Worm   225 YAMPAFTWASGDNGKCSNCPANAPACYQGLCYMPKNYEA 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 36/186 (19%)
lon-1NP_498166.1 SCP 81..211 CDD:214553 35/180 (19%)

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