DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17575 and glipr1a

DIOPT Version :10

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_017210734.1 Gene:glipr1a / 108179203 ZFINID:ZDB-GENE-110309-2 Length:269 Species:Danio rerio


Alignment Length:219 Identity:44/219 - (20%)
Similarity:71/219 - (32%) Gaps:47/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LNELNEYRDRIARGDLMGFSP-ATRMATLQWDQELASFAELNVKRCALV-NDHCRNSEQFRNVAQ 130
            :.|.|:.|..:        || |..|..:.||..||..|....:.|... |.|.|.:::......
Zfish    36 VREHNQNRSSV--------SPTAANMRYMTWDAALAVTARAWARFCLFKHNIHLREAKRVHPTFT 92

  Fly   131 VVAEGGWQGDPLPPSSPSDPPNPEAPIPVEYHTEDEVIKATLEQMFAEYKECSMRDIIAFSPPNN 195
            .|.|..|.|.|....:                     :|:.:.....|.|:        ::..||
Zfish    93 TVGENIWAGAPYSRFT---------------------VKSAVFSWVNELKD--------YNYNNN 128

  Fly   196 RILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQYMTCNFVRT-NDVNAP 259
               :....|...::||:|...:..|||.:.............::..|  ...||:... |.....
Zfish   129 ---QCNDKKVCGHYTQVVWADSYKVGCAVQTCPNGVAETHFSNIQGV--IFVCNYATAGNFAGRS 188

  Fly   260 VYQSGDRPATECRSGRNPVFINLC 283
            .|:.| ...:.| .|.:....|||
Zfish   189 PYKQG-ASCSGC-GGSDKCERNLC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 CAP_euk 64..250 CDD:349399 35/183 (19%)
glipr1aXP_017210734.1 CAP_GLIPR1-like 30..182 CDD:349404 36/187 (19%)

Return to query results.
Submit another query.