DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and crispld2

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:257 Identity:58/257 - (22%)
Similarity:96/257 - (37%) Gaps:81/257 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PDAHIVRITTARRTMILNELNEYRDR--------IARGDLMGFSPATRMATLQWDQELASFAELN 108
            |||.:    ..||.:      |:.||        ..||::  :..|:.|..:.||.||...|...
Zfish    46 PDAPV----RTRRAI------EWSDREEILKLHNKLRGEV--YPTASNMEYMIWDDELERSATSW 98

  Fly   109 VKRCALVNDHCRNSEQFRNVAQVVAE--GGWQGDPLPPSSPSDPPNPEAPIPVEYHTE---DEVI 168
            .::|..  :| ...:...::.|.:|.  |.::       ||:            ||.:   |||.
Zfish    99 AEQCQW--EH-GPQDLLMSIGQNLAVHWGRYR-------SPA------------YHVQAWYDEVK 141

  Fly   169 KATLEQMFAEYKECSMRDIIAFSPPNNRILRLRVSKC----IAYFTQLVRDSTTHVGCGI-LRQT 228
            ..|    :....||:     .:.|          .:|    ..::||||..:|..|||.: :...
Zfish   142 DYT----YPYPHECN-----PWCP----------ERCSGPMCTHYTQLVWATTNRVGCAVHVCPR 187

  Fly   229 KNTTNEAGQSLSSVHQYMTCNF-VRTNDVNAPVYQSGDRPATECRSGRNPVFINLCSVNEIY 289
            .|...|..::.    .|:.||: .:.|.:....||.| ||.::|    .|.:..:|..|..|
Zfish   188 MNVWGEIWENA----VYLVCNYSPKGNWIGEAPYQHG-RPCSQC----PPSYGGVCRDNLCY 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 42/203 (21%)
crispld2XP_003199065.1 SCP_euk 61..206 CDD:240180 40/191 (21%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585813
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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