DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17575 and crispld1a

DIOPT Version :9

Sequence 1:NP_001188917.1 Gene:CG17575 / 36414 FlyBaseID:FBgn0250842 Length:298 Species:Drosophila melanogaster
Sequence 2:XP_001920421.2 Gene:crispld1a / 100149104 ZFINID:ZDB-GENE-090612-1 Length:508 Species:Danio rerio


Alignment Length:247 Identity:58/247 - (23%)
Similarity:90/247 - (36%) Gaps:68/247 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ITTARRTMILNELNEYRDRIARGDLMGFSPATRMATLQWDQELASFAELNVKRCALVNDHCRNSE 123
            ||.:....||:..|:.|.::       :.||:.|..:.||.||...||...:.|  :.:|     
Zfish    62 ITASDMQAILDLHNKLRGQV-------YPPASNMEYMVWDNELERSAEEWAETC--LWEH----- 112

  Fly   124 QFRNVAQVVAEGG------WQGDPLPPSSPSDPPNPEAPIPVEYHTE---DEVIKATLEQMFAEY 179
               ..|.::.:.|      | |...||:|               |.:   |||    .:..|...
Zfish   113 ---GPAGLLPQIGQNLGVHW-GRYRPPTS---------------HVQAWYDEV----KDYSFPYP 154

  Fly   180 KECSMRDIIAFSPPNNRILRLRVSKCIAYFTQLVRDSTTHVGCGILRQTKNTTNEAGQSLSSVHQ 244
            :||:.......|.|           ...::||||..:::.:||.|  ......|..||..:.. .
Zfish   155 QECNPHCPFRCSGP-----------VCTHYTQLVWATSSRIGCAI--NVCYNMNVWGQIWAKA-V 205

  Fly   245 YMTCNF-VRTNDVNAPVYQSGDRPATECRSGRNPVFINLCSVNEIY--DSSN 293
            |:.||: .:.|......|:.|    |.| |...|.:..:|..|..|  |..|
Zfish   206 YLVCNYSPKGNWWGYAPYKHG----TSC-SACPPSYGGVCRENLCYKGDGKN 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17575NP_001188917.1 SCP_euk 64..250 CDD:240180 43/194 (22%)
crispld1aXP_001920421.2 SCP_euk 68..212 CDD:240180 44/194 (23%)
LCCL 298..381 CDD:128866
LCCL 401..500 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585687
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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