DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or49b and Or42a

DIOPT Version :9

Sequence 1:NP_523721.1 Gene:Or49b / 36413 FlyBaseID:FBgn0028963 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:336 Identity:56/336 - (16%)
Similarity:128/336 - (38%) Gaps:66/336 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 MLVLWINTVLRAYLLLADHDRYLALIQKLTEAYYDLLNLNDSYISEILD-----QVNKVGKLMAR 121
            :|::|                  ||:::..||.    ||.|.....|.|     |:::...|..|
  Fly   100 VLIVW------------------ALVKRFDEAN----NLLDEMDRRITDPGERLQIHRAVSLSNR 142

  Fly   122 GNLFFGMLTSMGFGLYPLSSSERVL--------PFGSKIPGLNEYES----------PYYEMWYI 168
            ...||       ..:|.:.::...|        |:.:..|.|:...|          .|:.|   
  Fly   143 IFFFF-------MAVYMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAM--- 197

  Fly   169 FQMLITPMGCCMY-IPYTSLIVGLIMFGIVRCKALQHRLRQVALKHPYGDRDPRELREEIIACIR 232
                   .|.|.. :......|..::...........|||::. .:||..::.:  .|.::.||:
  Fly   198 -------AGACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLG-TYPYESQEQK--YERLVQCIQ 252

  Fly   233 YQQSIIEYMDHINELTTMMFLFELMAFSALLCALLFMLIIVSGTSQLIIVCMYINMILAQILALY 297
            ..:.|:.::|.:..:.:.....:.:....:|...|..:::.:.....|....::..:|.:.....
  Fly   253 DHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAIAALSFMAAVLLETTPFC 317

  Fly   298 WYANELREQNLAVATAAYETEWFTFDVPLRKNILFMMMRAQRPAAILLGNIRPITLELFQNLLNT 362
            ...|.|.|....:|.|.:::.|...:...:|.:::.:.:.|:|...:..|:.||::....::...
  Fly   318 ILCNYLTEDCYKLADALFQSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVFPISVGTNISVTKF 382

  Fly   363 TYTFFTVLKRV 373
            :::.||::|::
  Fly   383 SFSVFTLVKQM 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or49bNP_523721.1 7tm_6 53..364 CDD:251636 53/325 (16%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 53/325 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465775
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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