DRSC/TRiP Functional Genomics Resources

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Protein Alignment sca and Angptl6

DIOPT Version :9

Sequence 1:NP_476710.2 Gene:sca / 36411 FlyBaseID:FBgn0003326 Length:799 Species:Drosophila melanogaster
Sequence 2:XP_011240901.1 Gene:Angptl6 / 70726 MGIID:1917976 Length:474 Species:Mus musculus


Alignment Length:477 Identity:126/477 - (26%)
Similarity:197/477 - (41%) Gaps:95/477 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 SQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQRN------LRRQVNGLRFHH--IDERVRS 358
            |.||.|: :.|.|......||     |::  |:..||.      |..:|..||.|.  ::.|:..
Mouse    45 SSEATQD-SELATLRMRLGRH-----EEL--LRALQRRAAEGGALADEVRALREHSLTLNTRLGQ 101

  Fly   359 IEVEQHRIANANFNLSSQIASLDKLHTSMLELLEDVEGLQTKMDKSIPELRHEISKLEFANAQIT 423
            :..:..:.|.|..:|.::.|:...|   :.|...|.|.          |.|...::|:..:||:.
Mouse   102 LRAQLQQEARAEPDLGAEPAAALGL---LAERALDAEA----------EARRTTARLQQLDAQLR 153

  Fly   424 SEQSLIREEGTNAARSLQAMA------VSVSVLQEEREGMRKLSANVDQLRTNVDRLQSLVNDEM 482
            ....|:.:..:...|..:|.|      ..|:|.:...:|...|...|..|     .|..||...:
Mouse   154 EHAQLMSQHSSLLGRLQRACAGPERGQQQVAVPRAPCQGHHPLLIWVLPL-----PLAPLVPLSL 213

  Fly   483 KNKLTHLNKP-HKRPHHQNVQAQMPQDDSPIDSVLAETLVSELENVETQYEAIINKLP----HDC 542
            ....::.::. .:.|.||..|:...|  .|..|:|           .|.:.|:..: |    .||
Mouse   214 VGSASNTSRRLDQTPEHQREQSLRQQ--GPPSSLL-----------PTGHLAVPTR-PVGPWRDC 264

  Fly   543 SEVHTQTDGLHLIAPAGQ-----------RHPLMTHC----TADGWTTVQRRFDGSADFNRSWAD 592
            :|.|          .||.           |..:...|    ...|||.:|||.|||.:|..:|..
Mouse   265 AEAH----------GAGHWQSGVYDLRLGRRVVAVWCEQQQEGGGWTVIQRRQDGSVNFFTNWQH 319

  Fly   593 YAQGFGAPGGEFWIGNEQLHHLTLDNCSRLQVQMQDIYDNVWVAEYKRFYISSRADGYRLHIAEY 657
            |..|||.|.||:|:|.|.:|.:|......|.:.::|.......|.|..|.:...:|.|||.:.:|
Mouse   320 YKAGFGRPEGEYWLGLEPVHQVTSRGDHELLILLEDWGGRAARAHYDSFSLEPESDHYRLRLGQY 384

  Fly   658 SGNASDALNYQQGMQFSAIDDDRDISQTHCAANYEGGWWFSHCQHANLNG----------RYNLG 712
            .|:|.|:|::.....||.:|.|||....:||..:.||||:..|.|:||||          ||..|
Mouse   385 HGDAGDSLSWHNDKPFSTVDRDRDSYSGNCALYHRGGWWYHACAHSNLNGVWYHGGHYRSRYQDG 449

  Fly   713 LTWFDAARNEWIAVKSSRMLVK 734
            :.|.: .|....::|.:.||.:
Mouse   450 VYWAE-FRGGAYSLKKAVMLTR 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scaNP_476710.2 PRK13923 <200..300 CDD:276343
FBG 538..736 CDD:214548 72/226 (32%)
Angptl6XP_011240901.1 PRK09039 57..>154 CDD:181619 25/116 (22%)
AMH_N <116..197 CDD:368070 18/93 (19%)
FReD 259..470 CDD:238040 71/221 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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