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Protein Alignment sca and Angptl1
DIOPT Version :9
Sequence 1: | NP_476710.2 |
Gene: | sca / 36411 |
FlyBaseID: | FBgn0003326 |
Length: | 799 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102853.1 |
Gene: | Angptl1 / 679942 |
RGDID: | 1598128 |
Length: | 300 |
Species: | Rattus norvegicus |
Alignment Length: | 188 |
Identity: | 38/188 - (20%) |
Similarity: | 75/188 - (39%) |
Gaps: | 47/188 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 210 LVDLQRTASNVAQDVQ-QRSSTFEDLATIRSDYQQLKLDLAAQRERQQQTEVYVQELREEMLQQE 273
||..|:....:..:.: |.:.|.:|:.| |.|.:.|| |:.::::|: .::||..
Rat 53 LVPEQKITGPICVNTKGQDAGTIKDMIT-RMDLENLK-DVLSRQKRE-----------IDVLQLV 104
Fly 274 QDFQHALVKLQQRTRKDGSSASVEEESGSQEANQEQTGLETTADHKRRHCRFQSEQIHQLQLAQR 338
.|....:|...:..||: |:..|...|.| .:||...
Rat 105 VDVDGNIVNEVKLLRKE-----------SRNMNSRVTQL-------------------YMQLLHE 139
Fly 339 NLRRQVNGLRFHHIDERVRSIEVEQHRIANANFNLSSQIASLDKL---HTSMLELLED 393
.:|::.|.|....::.::.::..|..::|.....|..:.|||..| .:.|:.:||:
Rat 140 IIRKRDNSLELSQLENKILNVTTEMLKMATRYRELEVKYASLTDLVNNQSVMITVLEE 197
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
sca | NP_476710.2 |
PRK13923 |
<200..300 |
CDD:276343 |
19/90 (21%) |
FBG |
538..736 |
CDD:214548 |
|
Angptl1 | NP_001102853.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2579 |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.810 |
|
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